RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 TXNDC11Q6PKC3 985 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 FNDC5Q8NAU1 212 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 GTF3C2Q8WUA4 911 aaPredicted RBP12.91□□□□□ -0.34
SNX1-201ENST00000261889 HTRA1Q92743 480 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 TMBIM1Q969X1 311 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 TAMM41Q96BW9 452 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 NEURL2Q9BR09 285 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 DNAI2Q9GZS0 605 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 ZFP14Q9HCL3 533 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 CFAP99D6REC4 459 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 NPHS1O60500 1241 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 SEPHS1P49903 392 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 SH3BGRP55822 239 aaPredicted RBP12.91□□□□□ -0.34
SNX1-201ENST00000261889 HUNKP57058 714 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 SLC13A2Q13183 592 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 DDR2Q16832 855 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 UBE2FQ969M7 185 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 MYEOVQ96EZ4 313 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 CENPNQ96H22 339 aaPredicted RBP12.91□□□□□ -0.34
SNX1-201ENST00000261889 SEZ6LQ9BYH1 1024 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 NMUR1Q9HB89 426 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 AMBNQ9NP70 447 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 POLR3BQ9NW08 1133 aaPredicted RBP12.91□□□□□ -0.34
SNX1-201ENST00000261889 SH3BGRLO75368 114 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 SERPINB7O75635 380 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 BMP10O95393 424 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 GOT2P00505 430 aaKnown RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 LDLRP01130 860 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 BMP2P12643 396 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 FMO3P31513 532 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 BCAP31P51572 246 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 VBP1P61758 197 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 SIM2Q14190 667 aaPredicted RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 BORAQ6PGQ7 559 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 ANKRD46Q86W74 232 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 CILP2Q8IUL8 1156 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 LINC01465Q8N7H1 131 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 ANKFN1Q8N957 763 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 RPL3LQ92901 407 aaKnown RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 ZNF560Q96MR9 790 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 EIF2B4Q9UI10 523 aaKnown RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 TRHDEQ9UKU6 1024 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 PCDHGA8Q9Y5G5 932 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 GMEB1Q9Y692 573 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 MYO15AQ9UKN7 3530 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 MAGEB16A2A368 324 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 H0Y858 1186 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 BTN3A1O00481 513 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 GNGT2O14610 69 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 TLR5O60602 858 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 OR4F21O95013 312 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 SNAI1O95863 264 aaPredicted RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 ABCB1P08183 1280 aaPredicted RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 DARSP14868 501 aaKnown RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 CDH3P22223 829 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 MYF6P23409 242 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 HRH2P25021 359 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 ACVRL1P37023 503 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 CAPGP40121 348 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 TMED10P49755 219 aaKnown RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 MAPRE2Q15555 327 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 PSMD5Q16401 504 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 NKG7Q16617 165 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 SMN1Q16637 294 aaKnown RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 SV2CQ496J9 727 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 TIGD5Q53EQ6 642 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 ZNF362Q5T0B9 420 aaPredicted RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 RBM23Q86U06 439 aaKnown RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 EFHBQ8N7U6 833 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 ZFP90Q8TF47 636 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 SEPT8Q92599 483 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 GFM2Q969S9 779 aaKnown RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 TOR3AQ9H497 397 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 NANOGQ9H9S0 305 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 TREX1Q9NSU2 369 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 RCOR3Q9P2K3 495 aaPredicted RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 ANAPC2Q9UJX6 822 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 AAR2Q9Y312 384 aaKnown RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 TSC22D4Q9Y3Q8 395 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 CCDC162PA2VCL2 907 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 MANSC4A6NHS7 340 aaPredicted RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 MYL3P08590 195 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 PLA2G16P53816 162 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 TSPY1Q01534 308 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 PTGR1Q14914 329 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 PAGE2BQ5JRK9 111 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 BHLHA9Q7RTU4 235 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 LGI2Q8N0V4 545 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 AFAP1L2Q8N4X5 818 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 TTC9BQ8N6N2 239 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 NDNFQ8TB73 568 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 NCLNQ969V3 563 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 FEM1AQ9BSK4 669 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 MROH8Q9H579 483 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 AGO3Q9H9G7 860 aaKnown RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 ABI2Q9NYB9 513 aaPredicted RBP12.9□□□□□ -0.34
SNX1-201ENST00000261889 PKD2L2Q9NZM6 624 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 PCDH10Q9P2E7 1040 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 RNF112Q9ULX5 631 aa12.9□□□□□ -0.34
SNX1-201ENST00000261889 PCDHB3Q9Y5E6 796 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms