RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TRMT6Q9UJA5 497 aaKnown RBP22.19■■□□□ 1.14
SIX3-201ENST00000260653 PIKFYVEQ9Y2I7 2098 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 E5RI56 91 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 ARL13AQ5H913 290 aaPredicted RBP22.18■■□□□ 1.14
SIX3-201ENST00000260653 TRIM67Q6ZTA4 783 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 ALYREFQ86V81 257 aaKnown RBP22.18■■□□□ 1.14
SIX3-201ENST00000260653 EXT2Q93063 718 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 SKA1Q96BD8 255 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 PHF21BQ96EK2 531 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 TMEM237Q96Q45 408 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 CLPBQ9H078 707 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 CLDND1Q9NY35 253 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 CD84Q9UIB8 345 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 IKZF3Q9UKT9 509 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 SARDHQ9UL12 918 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 TBC1D3BA6NDS4 549 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 IPO13O94829 963 aaKnown RBP22.18■■□□□ 1.14
SIX3-201ENST00000260653 ZNF7P17097 686 aaPredicted RBP22.18■■□□□ 1.14
SIX3-201ENST00000260653 SPINT3P49223 89 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 METAP1P53582 386 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 BNIP1Q12981 228 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 ARHGEF7Q14155 803 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 ZNF234Q14588 700 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 RBFAQ8N0V3 343 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 CLDN19Q8N6F1 224 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 PRR11Q96HE9 360 aaPredicted RBP22.18■■□□□ 1.14
SIX3-201ENST00000260653 LRIG1Q96JA1 1093 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 ZDHHC4Q9NPG8 344 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 ZFP69BQ9UJL9 534 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 COMMD10Q9Y6G5 202 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 PRSS21Q9Y6M0 314 aa22.18■■□□□ 1.14
SIX3-201ENST00000260653 PLXNB3Q9ULL4 1909 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 C16orf96A6NNT2 1141 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 MPSTP25325 297 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 VIPR1P32241 457 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 PPARGP37231 505 aaPredicted RBP22.17■■□□□ 1.14
SIX3-201ENST00000260653 DNAJB13P59910 316 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 HNRNPA1L2Q32P51 320 aaKnown RBP22.17■■□□□ 1.14
SIX3-201ENST00000260653 GPR33Q49SQ1 333 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 TTC7BQ86TV6 843 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 LSMEM2Q8N112 164 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 NXPE1Q8N323 547 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 SHCBP1LQ9BZQ2 653 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 DERL2Q9GZP9 239 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 WWP1Q9H0M0 922 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 ACTR5Q9H9F9 607 aaPredicted RBP22.17■■□□□ 1.14
SIX3-201ENST00000260653 PCDHB1Q9Y5F3 818 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 KPNA3O00505 521 aaPredicted RBP22.17■■□□□ 1.14
SIX3-201ENST00000260653 CD9P21926 228 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 GDI1P31150 447 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 ZBTB16Q05516 673 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 ASPHQ12797 758 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 ATP13A5Q4VNC0 1218 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 CLNKQ7Z7G1 428 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 ELSPBP1Q96BH3 223 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 TTC1Q99614 292 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 ABCG8Q9H221 673 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 NCKIPSDQ9NZQ3 722 aa22.17■■□□□ 1.14
SIX3-201ENST00000260653 AGAP14A8MT82 685 aa22.16■■□□□ 1.14
SIX3-201ENST00000260653 TSPAN12O95859 305 aa22.16■■□□□ 1.14
SIX3-201ENST00000260653 CYP2A6P11509 494 aaPredicted RBP22.16■■□□□ 1.14
SIX3-201ENST00000260653 CLCN7P51798 805 aa22.16■■□□□ 1.14
SIX3-201ENST00000260653 PTPN5P54829 565 aa22.16■■□□□ 1.14
SIX3-201ENST00000260653 ACTN3Q08043 901 aaPredicted RBP22.16■■□□□ 1.14
SIX3-201ENST00000260653 C9orf64Q5T6V5 341 aa22.16■■□□□ 1.14
SIX3-201ENST00000260653 PARS2Q7L3T8 475 aaKnown RBP22.16■■□□□ 1.14
SIX3-201ENST00000260653 HSD11B1LQ7Z5J1 315 aa22.16■■□□□ 1.14
SIX3-201ENST00000260653 PLEKHG4BQ96PX9 1271 aa22.16■■□□□ 1.14
SIX3-201ENST00000260653 DKK3Q9UBP4 350 aa22.16■■□□□ 1.14
SIX3-201ENST00000260653 MYO1CO00159 1063 aa22.16■■□□□ 1.14
SIX3-201ENST00000260653 ZNF195O14628 629 aa22.16■■□□□ 1.14
SIX3-201ENST00000260653 ZNF30P17039 623 aa22.16■■□□□ 1.14
SIX3-201ENST00000260653 RPS3P23396 243 aaKnown RBP eCLIP22.16■■□□□ 1.14
SIX3-201ENST00000260653 PTRHD1Q6GMV3 140 aaKnown RBP22.16■■□□□ 1.14
SIX3-201ENST00000260653 RPS27LQ71UM5 84 aaKnown RBP22.16■■□□□ 1.14
SIX3-201ENST00000260653 PIWIL4Q7Z3Z4 852 aaKnown RBP22.16■■□□□ 1.14
SIX3-201ENST00000260653 CPNE9Q8IYJ1 553 aa22.16■■□□□ 1.14
SIX3-201ENST00000260653 CCDC126Q96EE4 140 aa22.16■■□□□ 1.14
SIX3-201ENST00000260653 SIKE1Q9BRV8 207 aa22.16■■□□□ 1.14
SIX3-201ENST00000260653 CDH19Q9H159 772 aa22.16■■□□□ 1.14
SIX3-201ENST00000260653 TFB2MQ9H5Q4 396 aaKnown RBP22.16■■□□□ 1.14
SIX3-201ENST00000260653 ANKRD12Q6UB98 2062 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 XPAP23025 273 aaPredicted RBP22.15■■□□□ 1.14
SIX3-201ENST00000260653 CTC1Q2NKJ3 1217 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 CFAP157Q5JU67 520 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 VWA5B1Q5TIE3 1220 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 SERPINA13PQ6UXR4 307 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 NKAPQ8N5F7 415 aaKnown RBP22.15■■□□□ 1.14
SIX3-201ENST00000260653 RHEBL1Q8TAI7 183 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 LKAAEAR1Q8TD35 194 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 EEF1AKMT1Q8WVE0 214 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 ERLEC1Q96DZ1 483 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 RIPOR3Q96MK2 946 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 ATOH8Q96SQ7 321 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 ILKAPQ9H0C8 392 aaPredicted RBP22.15■■□□□ 1.14
SIX3-201ENST00000260653 TMEM245Q9H330 911 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 PKD2L2Q9NZM6 624 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 RAP2CQ9Y3L5 183 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 DENND4AQ7Z401 1863 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 EDDM13A0A1B0GTR0 161 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms