RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 BMFQ96LC9 184 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 WDR26Q9H7D7 661 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 SMYD2Q9NRG4 433 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 RAPGEFL1Q9UHV5 662 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 APPL1Q9UKG1 709 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 PCDH15Q96QU1 1955 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 A0A1W2PR77 199 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 PROB1E7EW31 1015 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 CCL22O00626 93 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 TOR1BO14657 336 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 MAGEC1O60732 1142 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 PRAMEF1O95521 474 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 SOD1P00441 154 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 THEGLP0DJG4 465 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 ARNTP27540 789 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 TEAD1P28347 426 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 ARSDP51689 593 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 PRAMEP78395 509 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 OVGP1Q12889 678 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 SMAD1Q15797 465 aaKnown RBP20.54■□□□□ 0.88
RTCA-201ENST00000260563 CEP85LQ5SZL2 805 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 KDM7AQ6ZMT4 941 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 HDAC10Q969S8 669 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 ZBTB9Q96C00 473 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 KLHDC7BQ96G42 594 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 CDKN2AIPNLQ96HQ2 116 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 TBATAQ96M53 351 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 AGAP2Q99490 1192 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 TMEM109Q9BVC6 243 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 ROPN1BQ9BZX4 212 aaPredicted RBP20.54■□□□□ 0.88
RTCA-201ENST00000260563 ROPN1Q9HAT0 212 aaPredicted RBP20.54■□□□□ 0.88
RTCA-201ENST00000260563 IL26Q9NPH9 171 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 VPS18Q9P253 973 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 NCDNQ9UBB6 729 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 FETUBQ9UGM5 382 aa20.54■□□□□ 0.88
RTCA-201ENST00000260563 POC1B-GALNT4F8VUJ3 575 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 H7C0S8 307 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 AGPSO00116 658 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 TCEA3O75764 348 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 PIAS1O75925 651 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 WNT1P04628 370 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 CFIP05156 583 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 CSNK1EP49674 416 aaKnown RBP20.53■□□□□ 0.88
RTCA-201ENST00000260563 C21orf59P57076 290 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 PFN3P60673 137 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 YPEL5P62699 121 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 ITGA9Q13797 1035 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 HSP90AA5PQ58FG0 334 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 HEATR4Q86WZ0 1026 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 CTAGE3PQ8IX95 158 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 OR13H1Q8NG92 308 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 EPS8L3Q8TE67 593 aaKnown RBP20.53■□□□□ 0.88
RTCA-201ENST00000260563 PPCSQ9HAB8 311 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 ZFATQ9P243 1243 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 OR1A2Q9Y585 309 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 FADS2P1A8MWK0 482 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 CXorf49A8MYA2 514 aaPredicted RBP20.53■□□□□ 0.88
RTCA-201ENST00000260563 GOLGA8KD6RF30 607 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 GOLGA8TH3BQL2 631 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 CACNB4O00305 520 aaPredicted RBP20.53■□□□□ 0.88
RTCA-201ENST00000260563 RASGRF2O14827 1237 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 VILLO15195 856 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 MC4RP32245 332 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 TRIM23P36406 574 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 THOP1P52888 689 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 THOC5Q13769 683 aaKnown RBP20.53■□□□□ 0.88
RTCA-201ENST00000260563 TRIM61Q5EBN2 209 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 ADAMTSL4Q6UY14 1074 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 Q6ZSR6 202 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 LRRC6Q86X45 466 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 PPM1NQ8N819 430 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 OR6P1Q8NGX9 317 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 DTX3LQ8TDB6 740 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 PAFAH2Q99487 392 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 APOOQ9BUR5 198 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 SUDS3Q9H7L9 328 aaPredicted RBP20.53■□□□□ 0.88
RTCA-201ENST00000260563 PHPT1Q9NRX4 125 aaPredicted RBP20.53■□□□□ 0.88
RTCA-201ENST00000260563 IARS2Q9NSE4 1012 aaKnown RBP20.53■□□□□ 0.88
RTCA-201ENST00000260563 SLC24A2Q9UI40 661 aa20.53■□□□□ 0.88
RTCA-201ENST00000260563 CCDC162PA2VCL2 907 aa20.52■□□□□ 0.87
RTCA-201ENST00000260563 GAPDHSO14556 408 aaPredicted RBP20.52■□□□□ 0.87
RTCA-201ENST00000260563 SRP72O76094 671 aaKnown RBP20.52■□□□□ 0.87
RTCA-201ENST00000260563 MYCLP1P12525 358 aaPredicted RBP20.52■□□□□ 0.87
RTCA-201ENST00000260563 GCAP28676 217 aa20.52■□□□□ 0.87
RTCA-201ENST00000260563 SLCO1A2P46721 670 aa20.52■□□□□ 0.87
RTCA-201ENST00000260563 CDK3Q00526 305 aa20.52■□□□□ 0.87
RTCA-201ENST00000260563 NAB1Q13506 487 aa20.52■□□□□ 0.87
RTCA-201ENST00000260563 PEX6Q13608 980 aa20.52■□□□□ 0.87
RTCA-201ENST00000260563 PDE1CQ14123 709 aaPredicted RBP20.52■□□□□ 0.87
RTCA-201ENST00000260563 CHRNA6Q15825 494 aa20.52■□□□□ 0.87
RTCA-201ENST00000260563 CCDC6Q16204 474 aa20.52■□□□□ 0.87
RTCA-201ENST00000260563 TEDDM1Q5T9Z0 273 aa20.52■□□□□ 0.87
RTCA-201ENST00000260563 SLC23A3Q6PIS1 610 aa20.52■□□□□ 0.87
RTCA-201ENST00000260563 MARK2Q7KZI7 788 aaKnown RBP20.52■□□□□ 0.87
RTCA-201ENST00000260563 CROCCP2Q86T23 111 aa20.52■□□□□ 0.87
RTCA-201ENST00000260563 FUBP1Q96AE4 644 aaKnown RBP20.52■□□□□ 0.87
RTCA-201ENST00000260563 MRRFQ96E11 262 aaKnown RBP20.52■□□□□ 0.87
RTCA-201ENST00000260563 TEX101Q9BY14 249 aa20.52■□□□□ 0.87
RTCA-201ENST00000260563 GPR27Q9NS67 375 aa20.52■□□□□ 0.87
RTCA-201ENST00000260563 SLC30A1Q9Y6M5 507 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms