RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 TCEAL4Q96EI5 215 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 TGM7Q96PF1 710 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 SMOC2Q9H3U7 446 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 NEUROD4Q9HD90 331 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 ACSS2Q9NR19 701 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 PGAP2Q9UHJ9 254 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 MRTO4Q9UKD2 239 aaKnown RBP6.32□□□□□ -1.4
BRIP1-201ENST00000259008 ZNF232Q9UNY5 417 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 USP15Q9Y4E8 981 aaPredicted RBP6.32□□□□□ -1.4
BRIP1-201ENST00000259008 A0A0G2JN53 185 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 SAP18O00422 153 aaKnown RBP6.32□□□□□ -1.4
BRIP1-201ENST00000259008 TRAFD1O14545 582 aaPredicted RBP6.32□□□□□ -1.4
BRIP1-201ENST00000259008 MID1O15344 667 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 ULK1O75385 1050 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 CST5P28325 142 aaPredicted RBP6.32□□□□□ -1.4
BRIP1-201ENST00000259008 PLOD1Q02809 727 aaPredicted RBP6.32□□□□□ -1.4
BRIP1-201ENST00000259008 BRAT1Q6PJG6 821 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 USP53Q70EK8 1073 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 ERN2Q76MJ5 926 aaKnown RBP6.32□□□□□ -1.4
BRIP1-201ENST00000259008 LYSMD3Q7Z3D4 306 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 BRSK1Q8TDC3 778 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 HDAC7Q8WUI4 952 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 FOXJ1Q92949 421 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 ERP27Q96DN0 273 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 C1orf50Q9BV19 199 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 PBX4Q9BYU1 374 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 SPATS2LQ9NUQ6 558 aaKnown RBP6.32□□□□□ -1.4
BRIP1-201ENST00000259008 ATAD3AQ9NVI7 634 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 USE1Q9NZ43 259 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 KLHL20Q9Y2M5 609 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 PCDHB1Q9Y5F3 818 aa6.32□□□□□ -1.4
BRIP1-201ENST00000259008 A0A1W2PQU0 124 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 B2RBV5 119 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 B3GALT2O43825 422 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 BEST1O76090 585 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 APBB3O95704 486 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 NR2F1P10589 423 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 MDH1P40925 334 aaKnown RBP6.31□□□□□ -1.4
BRIP1-201ENST00000259008 GSSP48637 474 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 GALK1P51570 392 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 MPP1Q00013 466 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 GABPB1Q06547 395 aaPredicted RBP6.31□□□□□ -1.4
BRIP1-201ENST00000259008 SLC10A7Q0GE19 358 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 STX5Q13190 355 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 RAB33AQ14088 237 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 C9orf64Q5T6V5 341 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 KHDRBS2Q5VWX1 349 aaKnown RBP6.31□□□□□ -1.4
BRIP1-201ENST00000259008 DUPD1Q68J44 220 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 UNC5BQ8IZJ1 945 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 PLD5Q8N7P1 536 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 DTX3LQ8TDB6 740 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 PROX1Q92786 737 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 EXOSC8Q96B26 276 aaKnown RBP6.31□□□□□ -1.4
BRIP1-201ENST00000259008 MRPL38Q96DV4 380 aaKnown RBP6.31□□□□□ -1.4
BRIP1-201ENST00000259008 UBE2ZQ9H832 354 aaPredicted RBP6.31□□□□□ -1.4
BRIP1-201ENST00000259008 APOBEC3BQ9UH17 382 aaKnown RBP6.31□□□□□ -1.4
BRIP1-201ENST00000259008 ADAMTS5Q9UNA0 930 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 KHNYNO15037 678 aaKnown RBP6.31□□□□□ -1.4
BRIP1-201ENST00000259008 HLA-DQB2P05538 268 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 PKMP14618 531 aaKnown RBP6.31□□□□□ -1.4
BRIP1-201ENST00000259008 ZNF24P17028 368 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 VARSP26640 1264 aaKnown RBP6.31□□□□□ -1.4
BRIP1-201ENST00000259008 MANFP55145 182 aaKnown RBP6.31□□□□□ -1.4
BRIP1-201ENST00000259008 AGBL2Q5U5Z8 902 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 PLEKHA7Q6IQ23 1121 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 GPRIN1Q7Z2K8 1008 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 TSEN2Q8NCE0 465 aaKnown RBP6.31□□□□□ -1.4
BRIP1-201ENST00000259008 CLHC1Q8NHS4 586 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 ITFG1Q8TB96 612 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 KCTD13Q8WZ19 329 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 SLC9A6Q92581 669 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 QKIQ96PU8 341 aaKnown RBP eCLIP6.31□□□□□ -1.45e-7■■■■■ 38.5
BRIP1-201ENST00000259008 MCCC2Q9HCC0 563 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 MCM8Q9UJA3 840 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 ARL2BPQ9Y2Y0 163 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 IGLON5A6NGN9 336 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 MCIDASD6RGH6 385 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 ANKRD65E5RJM6 399 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 FAM227AF5H4B4 570 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 KDELR3O43731 214 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 PLGP00747 810 aaPredicted RBP6.31□□□□□ -1.4
BRIP1-201ENST00000259008 HOXA11P31270 313 aaPredicted RBP6.31□□□□□ -1.4
BRIP1-201ENST00000259008 BUD31P41223 144 aaPredicted RBP6.31□□□□□ -1.4
BRIP1-201ENST00000259008 GPD2P43304 727 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 BDKRB1P46663 353 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 PLA2G16P53816 162 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 IRX1P78414 480 aaPredicted RBP6.31□□□□□ -1.4
BRIP1-201ENST00000259008 NAB1Q13506 487 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 NPY5RQ15761 445 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 TMEM240Q5SV17 173 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 TRIM40Q6P9F5 258 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 IYDQ6PHW0 289 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 GPRIN3Q6ZVF9 776 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 BBS12Q6ZW61 710 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 TAS1R3Q7RTX0 852 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 TMEM25Q86YD3 366 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 FAM20CQ8IXL6 584 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 CRYBG2Q8N1P7 616 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 TCP10LQ8TDR4 215 aa6.31□□□□□ -1.4
BRIP1-201ENST00000259008 DTNBP1Q96EV8 351 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms