RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 MDGA1Q8NFP4 955 aa14.3□□□□□ -0.12
HIF3A-202ENST00000244303 DBF4BQ8NFT6 615 aa14.3□□□□□ -0.12
HIF3A-202ENST00000244303 LRRC58Q96CX6 371 aa14.3□□□□□ -0.12
HIF3A-202ENST00000244303 RMDN1Q96DB5 314 aa14.3□□□□□ -0.12
HIF3A-202ENST00000244303 ZNF512Q96ME7 567 aaPredicted RBP14.3□□□□□ -0.12
HIF3A-202ENST00000244303 ZNF599Q96NL3 588 aa14.3□□□□□ -0.12
HIF3A-202ENST00000244303 SMIM14Q96QK8 99 aa14.3□□□□□ -0.12
HIF3A-202ENST00000244303 GPR21Q99679 349 aa14.3□□□□□ -0.12
HIF3A-202ENST00000244303 CCDC68Q9H2F9 335 aa14.3□□□□□ -0.12
HIF3A-202ENST00000244303 CCM2LQ9NUG4 571 aaPredicted RBP14.3□□□□□ -0.12
HIF3A-202ENST00000244303 GALPQ9UBC7 116 aa14.3□□□□□ -0.12
HIF3A-202ENST00000244303 PCDHB7Q9Y5E2 793 aa14.3□□□□□ -0.12
HIF3A-202ENST00000244303 DHRS12A0PJE2 317 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 MTMR11A4FU01 709 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 NPEPPSL1A6NEC2 478 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 SAC3D1A6NKF1 404 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 H6PDO95479 791 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 HSD17B1P14061 328 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 IDO1P14902 403 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 UGT1A6P19224 532 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 PRDX3P30048 256 aaKnown RBP14.29□□□□□ -0.12
HIF3A-202ENST00000244303 CDKN1CP49918 316 aaPredicted RBP14.29□□□□□ -0.12
HIF3A-202ENST00000244303 SCNN1BP51168 640 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 APLP1P51693 650 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 GNA12Q03113 381 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 RAD51Q06609 339 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 GPNMBQ14956 572 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 TMEM259Q4ZIN3 620 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 NHSL2Q5HYW2 709 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 ANKS6Q68DC2 871 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 PPP4R4Q6NUP7 873 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 BLOC1S3Q6QNY0 202 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 GRIN3AQ8TCU5 1115 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 DIS3LQ8TF46 1054 aaKnown RBP14.29□□□□□ -0.12
HIF3A-202ENST00000244303 CAPNS2Q96L46 248 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 CASD1Q96PB1 797 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 TCF12Q99081 682 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 CCT7Q99832 543 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 ELAC1Q9H777 363 aaKnown RBP14.29□□□□□ -0.12
HIF3A-202ENST00000244303 CAAP1Q9H8G2 361 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 PREBQ9HCU5 417 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 SLC52A3Q9NQ40 469 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 OLAHQ9NV23 265 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 DDX18Q9NVP1 670 aaKnown RBP14.29□□□□□ -0.12
HIF3A-202ENST00000244303 GID8Q9NWU2 228 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 hCG_2014768A0A024R1R8 64 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 ARHGAP10A1A4S6 786 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 FAM149AA5PLN7 773 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 AQP12BA6NM10 295 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 H3BNH8 94 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 H3BSA7 217 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 NDUFS3O75489 264 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 VNN2O95498 520 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 ALDH2P05091 517 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 RPS17P08708 135 aaKnown RBP14.29□□□□□ -0.12
HIF3A-202ENST00000244303 AGTR2P50052 363 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 ADRM1Q16186 407 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 ACBD5Q5T8D3 534 aaPredicted RBP14.29□□□□□ -0.12
HIF3A-202ENST00000244303 AFTPHQ6ULP2 937 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 RSPO2Q6UXX9 243 aaPredicted RBP14.29□□□□□ -0.12
HIF3A-202ENST00000244303 RNF19BQ6ZMZ0 732 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 AQP12AQ8IXF9 295 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 BBS5Q8N3I7 341 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 GIPC2Q8TF65 315 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.29□□□□□ -0.12
HIF3A-202ENST00000244303 FUBP1Q96AE4 644 aaKnown RBP14.29□□□□□ -0.12
HIF3A-202ENST00000244303 SLC30A3Q99726 388 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 ZBED2Q9BTP6 218 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 CINPQ9BW66 212 aaPredicted RBP14.29□□□□□ -0.12
HIF3A-202ENST00000244303 ANKRD60Q9BZ19 345 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 TRIM15Q9C019 465 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.29□□□□□ -0.12
HIF3A-202ENST00000244303 HMX1Q9NP08 348 aaPredicted RBP14.29□□□□□ -0.12
HIF3A-202ENST00000244303 PNPLA3Q9NST1 481 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 GALNT8Q9NY28 637 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 GPR45Q9Y5Y3 372 aa14.29□□□□□ -0.12
HIF3A-202ENST00000244303 ZFP37Q9Y6Q3 630 aaPredicted RBP14.29□□□□□ -0.12
HIF3A-202ENST00000244303 BTN3A1O00481 513 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 TPST1O60507 370 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 OXTRP30559 389 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 SLC11A1P49279 550 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 BNIP2Q12982 314 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 INPP5AQ14642 412 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 LCN8Q6JVE9 175 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 BORAQ6PGQ7 559 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 TRIML2Q8N7C3 387 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 VPS33AQ96AX1 596 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 TEX37Q96LM6 180 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 PSKH2Q96QS6 385 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 HAUS8Q9BT25 410 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 SPON2Q9BUD6 331 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 MAGEH1Q9H213 219 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 MARCH5Q9NX47 278 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 ACTR3BQ9P1U1 418 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 HCSTQ9UBK5 93 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 SEPT3Q9UH03 358 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 MYRFQ9Y2G1 1151 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 PCDHA9Q9Y5H5 950 aa14.28□□□□□ -0.12
HIF3A-202ENST00000244303 ARPC2O15144 300 aa14.27□□□□□ -0.12
HIF3A-202ENST00000244303 PFDN1O60925 122 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms