RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 DUSP4Q13115 394 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 SLC13A2Q13183 592 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 TOB2Q14106 344 aaPredicted RBP10.24□□□□□ -0.77
SLF2-201ENST00000238961 MTF1Q14872 753 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 TBC1D10CQ8IV04 446 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 BEND7Q8N7W2 519 aaPredicted RBP10.24□□□□□ -0.77
SLF2-201ENST00000238961 OR4C6Q8NH72 309 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 STAG3L4Q8TBR4 150 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 XAGE5Q8WWM1 108 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 SLC25A36Q96CQ1 311 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 SLC7A6OSQ96CW6 309 aaPredicted RBP10.24□□□□□ -0.77
SLF2-201ENST00000238961 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.24□□□□□ -0.772e-6■■■■□ 23
SLF2-201ENST00000238961 SERINC1Q9NRX5 453 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 SIRPGQ9P1W8 387 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 HBS1LQ9Y450 684 aaKnown RBP10.24□□□□□ -0.77
SLF2-201ENST00000238961 PCDHGC5Q9Y5F6 944 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 SSX4O60224 188 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 FADS2O95864 444 aaKnown RBP10.24□□□□□ -0.77
SLF2-201ENST00000238961 ERCC1P07992 297 aaPredicted RBP10.24□□□□□ -0.77
SLF2-201ENST00000238961 DNAJA1P31689 397 aaKnown RBP10.24□□□□□ -0.77
SLF2-201ENST00000238961 ALDH5A1P51649 535 aaPredicted RBP10.24□□□□□ -0.77
SLF2-201ENST00000238961 ANTXR2P58335 489 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 KDM7AQ6ZMT4 941 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 C17orf64Q86WR6 236 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 ZNF558Q96NG5 402 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 THAP2Q9H0W7 228 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 ISCUQ9H1K1 167 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 PLEKHA3Q9HB20 300 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 CENPMQ9NSP4 180 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 GRHL1Q9NZI5 618 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.24□□□□□ -0.77
SLF2-201ENST00000238961 SLC24A2Q9UI40 661 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 ADH1CP00326 375 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 USP17L7P0C7H9 530 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 CHRNB4P30926 498 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 GP5P40197 560 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 GRK1Q15835 563 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 LCN1P1Q5VSP4 162 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 MLIPQ5VWP3 458 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 DUS1LQ6P1R4 473 aaKnown RBP10.24□□□□□ -0.77
SLF2-201ENST00000238961 FIBCD1Q8N539 461 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 TRPM4Q8TD43 1214 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 SEC61A2Q9H9S3 476 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 RRN3Q9NYV6 651 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 STAP2Q9UGK3 403 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 KCNE2Q9Y6J6 123 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 DUSP10Q9Y6W6 482 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 ZNF35P13682 527 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 PTGS2P35354 604 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 WASP42768 502 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 GMPSP49915 693 aaPredicted RBP10.24□□□□□ -0.77
SLF2-201ENST00000238961 PDIA5Q14554 519 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 NKAPLQ5M9Q1 402 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 B3GNT6Q6ZMB0 384 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 LAS2Q8IYD9 372 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 SLC43A3Q8NBI5 491 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 PPP3R2Q96LZ3 170 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 LPIN3Q9BQK8 851 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 SGK2Q9HBY8 427 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 TBCCD1Q9NVR7 557 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 SLC26A4O43511 780 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 BDNFP23560 247 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 CHKAP35790 457 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 CD86P42081 329 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 CREMQ03060 361 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 NAIF1Q69YI7 327 aaPredicted RBP10.24□□□□□ -0.77
SLF2-201ENST00000238961 ZNF782Q6ZMW2 699 aaPredicted RBP10.24□□□□□ -0.77
SLF2-201ENST00000238961 CPA6Q8N4T0 437 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 KCNJ9Q92806 393 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 TUBGCP5Q96RT8 1024 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 ZNF717Q9BY31 904 aaPredicted RBP10.24□□□□□ -0.77
SLF2-201ENST00000238961 FAM83DQ9H4H8 585 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 EMC3Q9P0I2 261 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 BUD23O43709 281 aaKnown RBP10.24□□□□□ -0.77
SLF2-201ENST00000238961 BRINP1O60477 761 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 OGNP20774 298 aaKnown RBP10.24□□□□□ -0.77
SLF2-201ENST00000238961 AGXTP21549 392 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 HERV-K104P61576 105 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 NIPAL4Q0D2K0 466 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 TYSND1Q2T9J0 566 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 INAVAQ3KP66 663 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 KCT2Q8NC54 265 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 OR14C36Q8NHC7 312 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 PNO1Q9NRX1 252 aaKnown RBP10.24□□□□□ -0.77
SLF2-201ENST00000238961 TMPRSS11EQ9UL52 423 aa10.24□□□□□ -0.77
SLF2-201ENST00000238961 KIDINS220Q9ULH0 1771 aa10.23□□□□□ -0.77
SLF2-201ENST00000238961 USP27XA6NNY8 438 aa10.23□□□□□ -0.77
SLF2-201ENST00000238961 PDPK1O15530 556 aa10.23□□□□□ -0.77
SLF2-201ENST00000238961 ACTL6BO94805 426 aa10.23□□□□□ -0.77
SLF2-201ENST00000238961 CTPS1P17812 591 aa10.23□□□□□ -0.77
SLF2-201ENST00000238961 PSMD8P48556 350 aa10.23□□□□□ -0.77
SLF2-201ENST00000238961 GPR107Q5VW38 600 aa10.23□□□□□ -0.77
SLF2-201ENST00000238961 TMPRSS6Q8IU80 811 aa10.23□□□□□ -0.77
SLF2-201ENST00000238961 ZCCHC10Q8TBK6 192 aa10.23□□□□□ -0.77
SLF2-201ENST00000238961 SCGB3A2Q96PL1 93 aa10.23□□□□□ -0.77
SLF2-201ENST00000238961 WDR24Q96S15 920 aa10.23□□□□□ -0.77
SLF2-201ENST00000238961 DPYSL5Q9BPU6 564 aa10.23□□□□□ -0.77
SLF2-201ENST00000238961 SETD4Q9NVD3 440 aa10.23□□□□□ -0.77
SLF2-201ENST00000238961 THAP1Q9NVV9 213 aa10.23□□□□□ -0.77
SLF2-201ENST00000238961 MARCH2Q9P0N8 246 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms