RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ASCC1Q8N9N2 400 aaKnown RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 MARCH2Q9P0N8 246 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 COL3A1P02461 1466 aaPredicted RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 DCDC1P59894 354 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 RALGPS1Q5JS13 557 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 IQSEC1Q6DN90 963 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 BEND5Q7L4P6 421 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 CMC1Q7Z7K0 106 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 CENPSQ8N2Z9 138 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 GALNT6Q8NCL4 622 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 OR4L1Q8NH43 312 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 TWIST2Q8WVJ9 160 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 LRRC3Q9BY71 257 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 CCNB2O95067 398 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 TIGD6Q17RP2 521 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 TRMT11Q7Z4G4 463 aaKnown RBP8.17□□□□□ -1.1
APOB-201ENST00000233242 RBFAQ8N0V3 343 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 OR4A15Q8NGL6 344 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 DCSTAMPQ9H295 470 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 CCRL2O00421 344 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 ANXA8P13928 327 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 TMEM62Q0P6H9 643 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 HLA-DQA1Q5Y7H0 255 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 FAM43BQ6ZT52 329 aaPredicted RBP8.17□□□□□ -1.1
APOB-201ENST00000233242 OR52K2Q8NGK3 314 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 DMRTB1Q96MA1 342 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 GFM1Q96RP9 751 aaKnown RBP8.17□□□□□ -1.1
APOB-201ENST00000233242 ATXN3LQ9H3M9 355 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 ABCG1P45844 678 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 HSD17B12Q53GQ0 312 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 EMC10Q5UCC4 262 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 USP30Q70CQ3 517 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 PLCZ1Q86YW0 608 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 FAM234BA2RU67 622 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 PSMD10O75832 226 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 CCNCP24863 283 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 RPL4P36578 427 aaKnown RBP8.17□□□□□ -1.1
APOB-201ENST00000233242 GPR162Q16538 588 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 ZNF697Q5TEC3 545 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 STYK1Q6J9G0 422 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 OGFOD2Q6N063 350 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 VSTM1Q6UX27 236 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 BRINP3Q76B58 766 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 REPS2Q8NFH8 660 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 CYP2W1Q8TAV3 490 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 LGMNQ99538 433 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 DNAJC5BQ9UF47 199 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 MYH11P35749 1972 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 AP2A1O95782 977 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 MAGP20916 626 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 ACSL1P33121 698 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 TAS2R41P59536 307 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 DLG2Q15700 870 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 FAM163AQ96GL9 167 aaPredicted RBP8.17□□□□□ -1.1
APOB-201ENST00000233242 SDCBP2Q9H190 292 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 PCDHB1Q9Y5F3 818 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 ATP6AP2A0A1C7CYW4 349 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 RNF225M0QZC1 329 aaPredicted RBP8.17□□□□□ -1.1
APOB-201ENST00000233242 ATP6AP2O75787 350 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 PRPS2P11908 318 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 MSX2P35548 267 aaPredicted RBP8.17□□□□□ -1.1
APOB-201ENST00000233242 MBTD1Q05BQ5 628 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 BNIP3Q12983 259 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 MON1BQ7L1V2 547 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 ADGRG6Q86SQ4 1221 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 FAXDC2Q96IV6 333 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 GDAP2Q9NXN4 497 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 NKX1-2Q9UD57 310 aaPredicted RBP8.17□□□□□ -1.1
APOB-201ENST00000233242 CD36P16671 472 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 CD72P21854 359 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 PBLDP30039 288 aaPredicted RBP8.17□□□□□ -1.1
APOB-201ENST00000233242 WSCD2Q2TBF2 565 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 HSD17B14Q9BPX1 270 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 RASSF1Q9NS23 344 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 TTLL13PA6NNM8 815 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 H3BSA7 217 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 CKMP06732 381 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 CBX5P45973 191 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 ARF5P84085 180 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 SIM2Q14190 667 aaPredicted RBP8.17□□□□□ -1.1
APOB-201ENST00000233242 ABCB9Q9NP78 766 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 SERPINA3P01011 423 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 TMEM53Q6P2H8 277 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 CPNE9Q8IYJ1 553 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 DNAJC11Q9NVH1 559 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 TMEM59LQ9UK28 342 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 TBC1D24Q9ULP9 559 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 PPM1HQ9ULR3 514 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 STXBP5LQ9Y2K9 1186 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 CPS1P31327 1500 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 BACE1P56817 501 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 ALG11Q2TAA5 492 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 AP5B1Q2VPB7 878 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 C6orf183Q5T699 404 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 ADGRA1Q86SQ6 560 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 INO80EQ8NBZ0 244 aaPredicted RBP8.17□□□□□ -1.1
APOB-201ENST00000233242 SLC30A2Q9BRI3 323 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 EIF3KQ9UBQ5 218 aaKnown RBP8.17□□□□□ -1.1
APOB-201ENST00000233242 MGAT4AQ9UM21 535 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 FPGTO14772 594 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms