RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 LINGO4Q6UY18 593 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 AHSA2Q719I0 299 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 GPR65Q8IYL9 337 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 ZNF558Q96NG5 402 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 TCF25Q9BQ70 676 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 HMX1Q9NP08 348 aaPredicted RBP13.31□□□□□ -0.28
NEK4-201ENST00000233027 SMPD3Q9NY59 655 aaPredicted RBP13.31□□□□□ -0.28
NEK4-201ENST00000233027 SLC17A6Q9P2U8 582 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 RIPK3Q9Y572 518 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 ZNF536O15090 1300 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.31□□□□□ -0.28
NEK4-201ENST00000233027 FFAR2O15552 330 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 F7P08709 466 aaPredicted RBP13.31□□□□□ -0.28
NEK4-201ENST00000233027 LIMK2P53671 638 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 HSDL1Q3SXM5 330 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 RPTNQ6XPR3 784 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 PARGQ86W56 976 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 CLIP4Q8N3C7 705 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 ZBTB2Q8N680 514 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 MAB21L3Q8N8X9 362 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 FEM1CQ96JP0 617 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 HSD3B7Q9H2F3 369 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 PHF11Q9UIL8 331 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 NR2E3Q9Y5X4 410 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 PEX10O60683 326 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 ALDH4A1P30038 563 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 HOXA10P31260 410 aaPredicted RBP13.3□□□□□ -0.28
NEK4-201ENST00000233027 RPS9P46781 194 aaKnown RBP13.3□□□□□ -0.28
NEK4-201ENST00000233027 GNPDA1P46926 289 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 CLCQ05315 142 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 C12orf50Q8NA57 414 aaPredicted RBP13.3□□□□□ -0.28
NEK4-201ENST00000233027 RERGQ96A58 199 aaPredicted RBP13.3□□□□□ -0.28
NEK4-201ENST00000233027 GPR20Q99678 358 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 TRMOQ9BU70 441 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 EBPLQ9BY08 206 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 TRIT1Q9H3H1 467 aaKnown RBP13.3□□□□□ -0.28
NEK4-201ENST00000233027 ING3Q9NXR8 418 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 MBD2Q9UBB5 411 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 GIT1Q9Y2X7 761 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 ELOVL7A1L3X0 281 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 NEDD8-MDP1E9PL57 170 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 MGRN1O60291 552 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 MT-CYBP00156 380 aaPredicted RBP13.3□□□□□ -0.28
NEK4-201ENST00000233027 HSPA7P48741 367 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 ATXN1P54253 815 aaKnown RBP13.3□□□□□ -0.28
NEK4-201ENST00000233027 IRF9Q00978 393 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 RGS1Q08116 209 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 TFAP2BQ92481 460 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 NKD2Q969F2 451 aaPredicted RBP13.3□□□□□ -0.28
NEK4-201ENST00000233027 TBATAQ96M53 351 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 DHX33Q9H6R0 707 aaKnown RBP13.3□□□□□ -0.28
NEK4-201ENST00000233027 TIMMDC1Q9NPL8 285 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 ZNF180Q9UJW8 692 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 GLYATL1P3A0A0U1RQE8 302 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 ABLIM1O14639 778 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 DUSP4Q13115 394 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 OGFOD2Q6N063 350 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 ESRP1Q6NXG1 681 aaKnown RBP13.3□□□□□ -0.28
NEK4-201ENST00000233027 ANKRD46Q86W74 232 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 KLHL23Q8NBE8 558 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 SLC4A11Q8NBS3 891 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 RACGAP1Q9H0H5 632 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 TNKS2Q9H2K2 1166 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 NKIRAS2Q9NYR9 191 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 SLC25A12O75746 678 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 TCEA3O75764 348 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 ELFN1P0C7U0 828 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 NR2F6P10588 404 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 PKMP14618 531 aaKnown RBP13.3□□□□□ -0.28
NEK4-201ENST00000233027 LIN54Q6MZP7 749 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 KIAA1324Q6UXG2 1013 aaKnown RBP13.3□□□□□ -0.28
NEK4-201ENST00000233027 POLE3Q9NRF9 147 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 RAI2Q9Y5P3 530 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 PMF1-BGLAPU3KQ54 211 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 hCG_2039718K7EN88 272 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 GTPBP1O00178 669 aaKnown RBP13.3□□□□□ -0.28
NEK4-201ENST00000233027 NOBOXO60393 691 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 CCNKO75909 580 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 BLMHQ13867 455 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.3□□□□□ -0.28
NEK4-201ENST00000233027 SH3PXD2AQ5TCZ1 1133 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 PIK3R6Q5UE93 754 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 TATDN1Q6P1N9 297 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 LIX1Q8N485 282 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 C1orf127Q8N9H9 656 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 IPCEF1Q8WWN9 437 aaPredicted RBP13.3□□□□□ -0.28
NEK4-201ENST00000233027 PIGKQ92643 395 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 KCNS3Q9BQ31 491 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 EBF4Q9BQW3 602 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 IPPKQ9H8X2 491 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 OSER1Q9NX31 292 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 TCAF1Q9Y4C2 921 aa13.3□□□□□ -0.28
NEK4-201ENST00000233027 PIP5K1BO14986 540 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 COL6A2P12110 1019 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 NDUFV1P49821 464 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 TAF10Q12962 218 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 KLF1Q13351 362 aaPredicted RBP13.29□□□□□ -0.28
NEK4-201ENST00000233027 USP41Q3LFD5 358 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 MON1AQ86VX9 555 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 AHI1Q8N157 1196 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms