RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 KCNA7Q96RP8 456 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 SH3GL1Q99961 368 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 BBS2Q9BXC9 721 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 RAD21L1Q9H4I0 556 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 TRPV5Q9NQA5 729 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 FLRT1Q9NZU1 646 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 RNF181Q9P0P0 153 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 CNOT11Q9UKZ1 510 aaKnown RBP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 SARDHQ9UL12 918 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 CDH9Q9ULB4 789 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 TIMM22Q9Y584 194 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 N6AMT1Q9Y5N5 214 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 A0A1B0GTL3 188 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 ARL5CA6NH57 179 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 PTGES3LE9PB15 166 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 POMCP01189 267 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 IGLV3-25P01717 112 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 SLC7A1P30825 629 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 SH3BP2P78314 561 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 CACNB2Q08289 660 aaPredicted RBP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 SLC10A7Q0GE19 358 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 CAPRIN1Q14444 709 aaKnown RBP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 VPS26BQ4G0F5 336 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 MIA3Q5JRA6 1907 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 FAM209AQ5JX71 171 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 TBCELQ5QJ74 424 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 OR10T2Q8NGX3 314 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 STON2Q8WXE9 905 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 DMRTB1Q96MA1 342 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 AKTIPQ9H8T0 292 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 NT5MQ9NPB1 228 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 FAM105AQ9NUU6 356 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 COQ3Q9NZJ6 369 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 MAP10Q9P2G4 905 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 KLQ9UEF7 1012 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 ZNHIT2Q9UHR6 403 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 IPO11Q9UI26 975 aaKnown RBP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 GNPTGQ9UJJ9 305 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 ERVK-11Q9UQG0 969 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 VWA7Q9Y334 891 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 BOLA1Q9Y3E2 137 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 PTCH2Q9Y6C5 1203 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 CCL15-CCL14A0A0B4J2E2 113 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 NME4O00746 187 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 PAMP19021 973 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 CD86P42081 329 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 LEPRP48357 1165 aaKnown RBP9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 ALDH3B2P48448 385 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 PHC1P78364 1004 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 NFATC3Q12968 1075 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 GRB7Q14451 532 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 CCL15Q16663 113 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 KDELC1Q6UW63 502 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 USP43Q70EL4 1123 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 SLC22A16Q86VW1 577 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 DHFR2Q86XF0 187 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 SPPL2CQ8IUH8 684 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 TMEM86AQ8N2M4 240 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 BRI3BPQ8WY22 251 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 HDAC10Q969S8 669 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 NSUN5Q96P11 429 aaKnown RBP9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 C1orf50Q9BV19 199 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 NMUR1Q9HB89 426 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 ST3GAL5Q9UNP4 418 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 LAMA3Q16787 3333 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 M0R3G1 203 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 NR5A2O00482 541 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 B3GAT3O94766 335 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 HAPLN1P10915 354 aaPredicted RBP9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 DNAJB1P25685 340 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 HPCAL1P37235 193 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 POLD2P49005 469 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 DSC2Q02487 901 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 MAPRE1Q15691 268 aaKnown RBP9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 IMPG1Q17R60 797 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 SMU1Q2TAY7 513 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 UGT3A2Q3SY77 523 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 UNC50Q53HI1 259 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 NHSL2Q5HYW2 709 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 ZNF678Q5SXM1 525 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 MANEALQ5VSG8 457 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 C8orf82Q6P1X6 216 aaPredicted RBP9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 AGMOQ6ZNB7 445 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 ADCK1Q86TW2 530 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 CILP2Q8IUL8 1156 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 NRBF2Q96F24 287 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 DACH2Q96NX9 599 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 SLC25A23Q9BV35 468 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 TOR3AQ9H497 397 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 EML4Q9HC35 981 aaKnown RBP9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 PKD2L2Q9NZM6 624 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 SEPT3Q9UH03 358 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 DNAJC15Q9Y5T4 150 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 CPQQ9Y646 472 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 HS3ST4Q9Y661 456 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 HTTP42858 3142 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 E9PAM4 449 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 H0Y858 1186 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 DLGAP1O14490 977 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 SNPHO15079 494 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms