RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 OR7A2PQ8NGA2 310 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 AARSD1Q9BTE6 412 aaKnown RBP11.46□□□□□ -0.57
NOD1-201ENST00000222823 VPS4AQ9UN37 437 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 GSTK1Q9Y2Q3 226 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 NRAPQ86VF7 1730 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 H3BM21 787 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 TM7SF2O76062 418 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 SLC6A2P23975 617 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 MAPKAPK2P49137 400 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 WDR4P57081 412 aaKnown RBP11.46□□□□□ -0.58
NOD1-201ENST00000222823 SP2Q02086 613 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 KLF1Q13351 362 aaPredicted RBP11.46□□□□□ -0.58
NOD1-201ENST00000222823 SIX1Q15475 284 aaPredicted RBP11.46□□□□□ -0.58
NOD1-201ENST00000222823 SOWAHAQ2M3V2 549 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 RFX4Q33E94 735 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 GPAT3Q53EU6 434 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 TSTD2Q5T7W7 516 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 ANXA8L1Q5VT79 327 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 ZDHHC20Q5W0Z9 365 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 DPY19L2P1Q6NXN4 242 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 C15orf39Q6ZRI6 1047 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 C17orf64Q86WR6 236 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 AMER2Q8N7J2 671 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 CLHC1Q8NHS4 586 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 PSMG2Q969U7 264 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 PPCDCQ96CD2 204 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 OXCT2Q9BYC2 517 aaPredicted RBP11.46□□□□□ -0.58
NOD1-201ENST00000222823 ZSCAN32Q9NX65 697 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 IKZF3Q9UKT9 509 aa11.46□□□□□ -0.58
NOD1-201ENST00000222823 XIRP1Q702N8 1843 aaKnown RBP11.46□□□□□ -0.58
NOD1-201ENST00000222823 A0A1W2PQ67 120 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 DYTNA2CJ06 578 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 TRIM43BA6NCK2 446 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 SERPINB7O75635 380 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 NMBRP28336 390 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 FOXN2P32314 431 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 SPAM1P38567 509 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 CDH4P55283 916 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 TAS2R39P59534 338 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 GHRHRQ02643 423 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 DCTN2Q13561 401 aaKnown RBP11.45□□□□□ -0.58
NOD1-201ENST00000222823 TRIM25Q14258 630 aaKnown RBP11.45□□□□□ -0.58
NOD1-201ENST00000222823 LSM12Q3MHD2 195 aaKnown RBP11.45□□□□□ -0.58
NOD1-201ENST00000222823 TIGD5Q53EQ6 642 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 VWA5B1Q5TIE3 1220 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 TAS1R3Q7RTX0 852 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 SPATA19Q7Z5L4 167 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 TBC1D21Q8IYX1 336 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 DEPDC4Q8N2C3 294 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 ZNF540Q8NDQ6 660 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 CMASQ8NFW8 434 aaPredicted RBP11.45□□□□□ -0.58
NOD1-201ENST00000222823 CLIP3Q96DZ5 547 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 AASDHPPTQ9NRN7 309 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 SOHLH2Q9NX45 425 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 GTF2IRD1Q9UHL9 959 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 MAGEL2Q9UJ55 1249 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 NFKBIEO00221 500 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 OR10H2O60403 315 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 TMEM63AO94886 807 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 KIR3DL1P43629 444 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 NDST2P52849 883 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 FOLH1Q04609 750 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 DPYSL2Q16555 572 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 HDDC2Q7Z4H3 204 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 CLEC4CQ8WTT0 213 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 HMCESQ96FZ2 354 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 DNAJC1Q96KC8 554 aaKnown RBP11.45□□□□□ -0.58
NOD1-201ENST00000222823 LENG8Q96PV6 779 aaPredicted RBP11.45□□□□□ -0.58
NOD1-201ENST00000222823 IPPKQ9H8X2 491 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 PNPLA3Q9NST1 481 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 IMP3Q9NV31 184 aaKnown RBP11.45□□□□□ -0.58
NOD1-201ENST00000222823 DNAJC11Q9NVH1 559 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 ZNF490Q9ULM2 529 aaPredicted RBP11.45□□□□□ -0.58
NOD1-201ENST00000222823 OR10H1Q9Y4A9 318 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 CACNB4O00305 520 aaPredicted RBP11.45□□□□□ -0.58
NOD1-201ENST00000222823 OR6B1O95007 311 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 PRAMEF1O95521 474 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 EOMESO95936 686 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 UQCRBP14927 111 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 CHSY3Q70JA7 882 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 OTOP2Q7RTS6 562 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 NPAS4Q8IUM7 802 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 DSELQ8IZU8 1212 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 CD99L2Q8TCZ2 262 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 ANKRD49Q8WVL7 239 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 FUBP3Q96I24 572 aaKnown RBP eCLIP11.45□□□□□ -0.58
NOD1-201ENST00000222823 FAM83DQ9H4H8 585 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 LRTM1Q9HBL6 345 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 IGSF9Q9P2J2 1179 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 MCM8Q9UJA3 840 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 FZD10Q9ULW2 581 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 TBC1D3DA0A087WVF3 549 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 TBC1D3IA0A087WXS9 549 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 TBC1D3EA0A087X179 549 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 TBC1D3KA0A087X1G2 549 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 TBC1D3FA6NER0 549 aaPredicted RBP11.45□□□□□ -0.58
NOD1-201ENST00000222823 TBC1D3LB9A6J9 549 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 INSIG1O15503 277 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 SUV39H1O43463 412 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 TBC1D3HP0C7X1 549 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms