RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 CTSAP10619 480 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 SERPINA4P29622 427 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 ACADVLP49748 655 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 MNX1P50219 401 aaPredicted RBP8.2□□□□□ -1.1
VAMP3-201ENST00000054666 PSME3P61289 254 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 IRX1P78414 480 aaPredicted RBP8.2□□□□□ -1.1
VAMP3-201ENST00000054666 XIAPP98170 497 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 CDC16Q13042 620 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 TRIP10Q15642 601 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 RBBP7Q16576 425 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 ZNF423Q2M1K9 1284 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 MAP7D1Q3KQU3 841 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 MPP7Q5T2T1 576 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 PTRHD1Q6GMV3 140 aaKnown RBP8.2□□□□□ -1.1
VAMP3-201ENST00000054666 FAM151BQ6UXP7 276 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 LARP4Q71RC2 724 aaKnown RBP eCLIP8.2□□□□□ -1.1
VAMP3-201ENST00000054666 ADAMTSL2Q86TH1 951 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 GPSM1Q86YR5 675 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 BBS7Q8IWZ6 715 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 CPNE9Q8IYJ1 553 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 PCYOX1LQ8NBM8 494 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 TUBGCP3Q96CW5 907 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 ALG14Q96F25 216 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 NSUN5Q96P11 429 aaKnown RBP8.2□□□□□ -1.1
VAMP3-201ENST00000054666 ECSITQ9BQ95 431 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 NUSAP1Q9BXS6 441 aaKnown RBP8.2□□□□□ -1.1
VAMP3-201ENST00000054666 VCXQ9H320 206 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 ZFYVE1Q9HBF4 777 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 SPAG4Q9NPE6 437 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 SEMA4BQ9NPR2 832 aaPredicted RBP8.2□□□□□ -1.1
VAMP3-201ENST00000054666 ASAH2Q9NR71 780 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 CACNA2D2Q9NY47 1150 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 C6orf203Q9P0P8 240 aaPredicted RBP8.2□□□□□ -1.1
VAMP3-201ENST00000054666 DNMT3BQ9UBC3 853 aaKnown RBP8.2□□□□□ -1.1
VAMP3-201ENST00000054666 EVLQ9UI08 416 aaPredicted RBP8.2□□□□□ -1.1
VAMP3-201ENST00000054666 GNPTGQ9UJJ9 305 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 APPL1Q9UKG1 709 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 PACSIN3Q9UKS6 424 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 DNAJC15Q9Y5T4 150 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 KIAA1671Q9BY89 1806 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 LRRC14BA6NHZ5 514 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 GREM1O60565 184 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 CNPP09543 421 aaKnown RBP8.19□□□□□ -1.1
VAMP3-201ENST00000054666 CSF2RAP15509 400 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 LBPP18428 481 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 XRCC1P18887 633 aaPredicted RBP8.19□□□□□ -1.1
VAMP3-201ENST00000054666 CSNK1DP48730 415 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 RGS4P49798 205 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 HTRA3P83110 453 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 LMAN2Q12907 356 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 RPS6KA2Q15349 733 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 GSTA3Q16772 222 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 RARS2Q5T160 578 aaKnown RBP8.19□□□□□ -1.1
VAMP3-201ENST00000054666 ANO7Q6IWH7 933 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 TPGS1Q6ZTW0 290 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 HTR3DQ70Z44 454 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 GAREM2Q75VX8 874 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 KBTBD6Q86V97 674 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 CAMK1DQ8IU85 385 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 KBTBD2Q8IY47 623 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 APCDD1Q8J025 514 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 RBFAQ8N0V3 343 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 MIER2Q8N344 545 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 PLCD3Q8N3E9 789 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 TMEM199Q8N511 208 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 FIBCD1Q8N539 461 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 BHLHE22Q8NFJ8 381 aaPredicted RBP8.19□□□□□ -1.1
VAMP3-201ENST00000054666 OR56A4Q8NGH8 313 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 GDPD5Q8WTR4 605 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 VWCEQ96DN2 955 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 C19orf43Q9BQ61 176 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 KLHL4Q9C0H6 718 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 CXorf56Q9H5V9 222 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 AKTIPQ9H8T0 292 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 PLK2Q9NYY3 685 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 NUDT4Q9NZJ9 180 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 SUCOQ9UBS9 1254 aaKnown RBP8.19□□□□□ -1.1
VAMP3-201ENST00000054666 PSMD13Q9UNM6 376 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 A0A0J9YYE9 177 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 A0A1W2PRU2 124 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 CAPN8A6NHC0 703 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 ZBBXA8MT70 800 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 K7ERQ8 282 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 NR5A2O00482 541 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 KLK8O60259 260 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 NRP2O60462 931 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 TIMP1P01033 207 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 TRBC1P01850 177 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 ARSAP15289 507 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 CD1EP15812 388 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 PFKLP17858 780 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 ARL1P40616 181 aaPredicted RBP8.19□□□□□ -1.1
VAMP3-201ENST00000054666 SNRPD1P62314 119 aaKnown RBP8.19□□□□□ -1.1
VAMP3-201ENST00000054666 MRPS22P82650 360 aaKnown RBP8.19□□□□□ -1.1
VAMP3-201ENST00000054666 ZXDBP98169 803 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 CEACAM7Q14002 265 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 PLEKHG6Q3KR16 790 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 GRAMD1BQ3KR37 738 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 SETMARQ53H47 684 aaPredicted RBP8.19□□□□□ -1.1
VAMP3-201ENST00000054666 LYPLAL1Q5VWZ2 237 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms