RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ADH1CP00326 375 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 ADH5P11766 374 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 ACRV1P26436 265 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 NNMTP40261 264 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 RECQLP46063 649 aaPredicted RBP14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 INHBCP55103 352 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 SHHQ15465 462 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 GEN1Q17RS7 908 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 EML3Q32P44 896 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 GDPD4Q6W3E5 623 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 MACC1Q6ZN28 852 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 Q6ZVU0 165 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 CUZD1Q86UP6 607 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 PTGR2Q8N8N7 351 aaPredicted RBP14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 FAM13CQ8NE31 585 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 DTX3LQ8TDB6 740 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 HCAR2Q8TDS4 363 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 FUBP1Q96AE4 644 aaKnown RBP14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 RSPRY1Q96DX4 576 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 CMTM5Q96DZ9 223 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 PHF21BQ96EK2 531 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 LRIG1Q96JA1 1093 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 PLEKHG4BQ96PX9 1271 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 CDCA3Q99618 268 aaPredicted RBP14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 SLC30A3Q99726 388 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 HEPHQ9BQS7 1158 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 NUF2Q9BZD4 464 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 CLPBQ9H078 707 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 ZNF385DQ9H6B1 395 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 ZDHHC6Q9H6R6 413 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 BRD9Q9H8M2 597 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 MRGBPQ9NV56 204 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 DZANK1Q9NVP4 752 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 OBP2AQ9NY56 170 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 GALPQ9UBC7 116 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 GNPTGQ9UJJ9 305 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 MAGEC1O60732 1142 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 FGF4P08620 206 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 BMP1P13497 986 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 HNRNPLP14866 589 aaKnown RBP eCLIP14.19□□□□□ -0.144e-9■■■■□ 21.4
RTFDC1-201ENST00000023939 CHRM3P20309 590 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 NAA25Q14CX7 972 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 CHRNA6Q15825 494 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 CRY1Q16526 586 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 LSM12Q3MHD2 195 aaKnown RBP14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 DNAL1Q4LDG9 190 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 WASHC2DQ5SRD0 308 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 LRRC66Q68CR7 880 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 TXNDC11Q6PKC3 985 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 TSPAN33Q86UF1 283 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 NXPE1Q8N323 547 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 SIDT2Q8NBJ9 832 aaKnown RBP14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 CHST14Q8NCH0 376 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 AGR3Q8TD06 166 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 ACTRT2Q8TDY3 377 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 TRPV4Q9HBA0 871 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 KLHL42Q9P2K6 505 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 IKZF3Q9UKT9 509 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 RNF112Q9ULX5 631 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 SLC8A2Q9UPR5 921 aa14.19□□□□□ -0.14
RTFDC1-201ENST00000023939 E5RI56 91 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 UBXN8O00124 270 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 SDHDO14521 159 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 ECI2O75521 394 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 UGT2B4P06133 528 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 ZNF30P17039 623 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 NCF2P19878 526 aaPredicted RBP14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 LHCGRP22888 699 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 DGKGP49619 791 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 PTSQ03393 145 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 TSNQ15631 228 aaKnown RBP14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 NPAS3Q8IXF0 933 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 ETFBKMTQ8IXQ9 262 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 ARHGAP24Q8N264 748 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 C12orf76Q8N812 135 aaPredicted RBP14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 RBM15BQ8NDT2 890 aaKnown RBP14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 GPR26Q8NDV2 337 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 BPIFB1Q8TDL5 484 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 SMARCD2Q92925 531 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 FAM136AQ96C01 138 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 ASB16Q96NS5 453 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 OSBPL1AQ9BXW6 950 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 WDR55Q9H6Y2 383 aaPredicted RBP14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 MEAF6Q9HAF1 191 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 LATS2Q9NRM7 1088 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 GTSE1Q9NYZ3 720 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 DKK3Q9UBP4 350 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 FNDC3AQ9Y2H6 1198 aaKnown RBP14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 WASF2Q9Y6W5 498 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 MYOFQ9NZM1 2061 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 E9PBE3 544 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 CDC7O00311 574 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 BTN3A1O00481 513 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 UBFD1O14562 309 aaKnown RBP14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 GPR39O43194 453 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 KLHL41O60662 606 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 SUPT7LO94864 414 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 RPS17P08708 135 aaKnown RBP14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 CHRM1P11229 460 aaPredicted RBP14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 NFKBIAP25963 317 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms