RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 PTK2BQ14289 1009 aa12.88□□□□□ -0.35
PHGDH-218ENST00000641491 IRF4Q15306 451 aa12.88□□□□□ -0.35
PHGDH-218ENST00000641491 SMAD1Q15797 465 aaKnown RBP12.88□□□□□ -0.35
PHGDH-218ENST00000641491 CHRNA6Q15825 494 aa12.88□□□□□ -0.35
PHGDH-218ENST00000641491 TMEM259Q4ZIN3 620 aa12.88□□□□□ -0.35
PHGDH-218ENST00000641491 HSP90AA5PQ58FG0 334 aa12.88□□□□□ -0.35
PHGDH-218ENST00000641491 LDLRAP1Q5SW96 308 aa12.88□□□□□ -0.35
PHGDH-218ENST00000641491 NEPROQ6NW34 567 aa12.88□□□□□ -0.35
PHGDH-218ENST00000641491 ZNF449Q6P9G9 518 aa12.88□□□□□ -0.35
PHGDH-218ENST00000641491 TMEM135Q86UB9 458 aa12.88□□□□□ -0.35
PHGDH-218ENST00000641491 RELL1Q8IUW5 271 aa12.88□□□□□ -0.35
PHGDH-218ENST00000641491 COPS8Q99627 209 aa12.88□□□□□ -0.35
PHGDH-218ENST00000641491 C1QTNF2Q9BXJ5 285 aa12.88□□□□□ -0.35
PHGDH-218ENST00000641491 ABCG8Q9H221 673 aa12.88□□□□□ -0.35
PHGDH-218ENST00000641491 FZD3Q9NPG1 666 aa12.88□□□□□ -0.35
PHGDH-218ENST00000641491 TREX1Q9NSU2 369 aa12.88□□□□□ -0.35
PHGDH-218ENST00000641491 NFKBIL1Q9UBC1 381 aaPredicted RBP12.88□□□□□ -0.35
PHGDH-218ENST00000641491 MOSPD1Q9UJG1 213 aa12.88□□□□□ -0.35
PHGDH-218ENST00000641491 ZFR2Q9UPR6 939 aaKnown RBP12.88□□□□□ -0.35
PHGDH-218ENST00000641491 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.88□□□□□ -0.35
PHGDH-218ENST00000641491 CACNA1GO43497 2377 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 ATG2BQ96BY7 2078 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 NCOR2Q9Y618 2525 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 A0A1W2PPC4 97 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 UBA6A0AVT1 1052 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-218ENST00000641491 METTL12A8MUP2 240 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 H7C0S8 307 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 QSOX1O00391 747 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 CCL22O00626 93 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 INPP4BO15327 924 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 SPINT1O43278 529 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 FAM153BP0C7A2 387 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 MYBL2P10244 700 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 ZNF7P17097 686 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-218ENST00000641491 OGNP20774 298 aaKnown RBP12.87□□□□□ -0.35
PHGDH-218ENST00000641491 SSTR1P30872 391 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 SLC12A2P55011 1212 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 PTPRCAPQ14761 206 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 NAA30Q147X3 362 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-218ENST00000641491 CDKN3Q16667 212 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 FAM153CQ494X1 144 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 LGSNQ5TDP6 509 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 STEAP4Q687X5 459 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 PNCKQ6P2M8 343 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 DGLUCYQ7Z3D6 616 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 TECPR1Q7Z6L1 1165 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 RBFAQ8N0V3 343 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 GOLGA6L1Q8N7Z2 621 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 GPR26Q8NDV2 337 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 OR13J1Q8NGT2 312 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 FBF1Q8TES7 1133 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 AENQ8WTP8 325 aaKnown RBP12.87□□□□□ -0.35
PHGDH-218ENST00000641491 SCAMP4Q969E2 229 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 BIRC7Q96CA5 298 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 HIC2Q96JB3 615 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 LENG8Q96PV6 779 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-218ENST00000641491 CLPBQ9H078 707 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 DUSP15Q9H1R2 295 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-218ENST00000641491 SUDS3Q9H7L9 328 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-218ENST00000641491 LRRC4CQ9HCJ2 640 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 IL26Q9NPH9 171 aa12.87□□□□□ -0.35
PHGDH-218ENST00000641491 TCRBV9S1A1TA0A576 114 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 GOLGA8KD6RF30 607 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 E5RI56 91 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 GOLGA8TH3BQL2 631 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 TP73O15350 636 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 RIPK2O43353 540 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 ABHD2P08910 425 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 ERVK-10P10266 1014 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 BCKDHBP21953 392 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 MSH2P43246 934 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 ACVR1Q04771 509 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 FRG1Q14331 258 aaKnown RBP12.86□□□□□ -0.35
PHGDH-218ENST00000641491 INPP5AQ14642 412 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 AGERQ15109 404 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 HENMT1Q5T8I9 393 aaKnown RBP12.86□□□□□ -0.35
PHGDH-218ENST00000641491 PTRHD1Q6GMV3 140 aaKnown RBP12.86□□□□□ -0.35
PHGDH-218ENST00000641491 DOK6Q6PKX4 331 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 ADAMTSL4Q6UY14 1074 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 KYAT3Q6YP21 454 aaKnown RBP12.86□□□□□ -0.35
PHGDH-218ENST00000641491 KIAA0408Q6ZU52 694 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 CROCCP2Q86T23 111 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 NLRP8Q86W28 1048 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 HEATR4Q86WZ0 1026 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 DCP2Q8IU60 420 aaKnown RBP12.86□□□□□ -0.35
PHGDH-218ENST00000641491 IGDCC3Q8IVU1 814 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 PPM1NQ8N819 430 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 UHMK1Q8TAS1 419 aaKnown RBP12.86□□□□□ -0.35
PHGDH-218ENST00000641491 DTX3LQ8TDB6 740 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 SCG3Q8WXD2 468 aaKnown RBP12.86□□□□□ -0.35
PHGDH-218ENST00000641491 GLYATL1Q969I3 302 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 VOPP1Q96AW1 172 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 MRRFQ96E11 262 aaKnown RBP12.86□□□□□ -0.35
PHGDH-218ENST00000641491 ZNF778Q96MU6 729 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 VPS35Q96QK1 796 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 TCF12Q99081 682 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 SEMA4AQ9H3S1 761 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 FAM96AQ9H5X1 160 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 PPCSQ9HAB8 311 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 INTS10Q9NVR2 710 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms