RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 IGSF8Q969P0 613 aa12.68□□□□□ -0.38
TCF4-289ENST00000637941 SLC39A3Q9BRY0 314 aa12.68□□□□□ -0.38
TCF4-289ENST00000637941 C1QTNF3Q9BXJ4 246 aa12.68□□□□□ -0.38
TCF4-289ENST00000637941 DUS2Q9NX74 493 aaKnown RBP12.68□□□□□ -0.38
TCF4-289ENST00000637941 ARIH1Q9Y4X5 557 aaPredicted RBP12.68□□□□□ -0.38
TCF4-289ENST00000637941 RNF103-CHMP3A0A140T963 221 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 A0A1B0GVG6 124 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 UBA6A0AVT1 1052 aaPredicted RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 FAM92AA1XBS5 289 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 GRXCR2A6NFK2 248 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 SOCS2O14508 198 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 SYN3O14994 580 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 NDUFS3O75489 264 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 SIX3O95343 332 aaPredicted RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 EOMESO95936 686 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 RPS17P08708 135 aaKnown RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 UROSP10746 265 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 EEFSECP57772 596 aaKnown RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 CACNB2Q08289 660 aaPredicted RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 GRB7Q14451 532 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 C10orf120Q5SQS8 335 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 MFSD14CQ5VZR4 134 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 PRR23BQ6ZRT6 265 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 GPR141Q7Z602 305 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 ZNF598Q86UK7 904 aaKnown RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 PTRH1Q86Y79 214 aaKnown RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 SPPL2CQ8IUH8 684 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 FIBCD1Q8N539 461 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 TERB1Q8NA31 727 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 FAM47BQ8NA70 645 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 TRPV3Q8NET8 790 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 SEPT8Q92599 483 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 CDKN2AIPNLQ96HQ2 116 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 KCTD14Q9BQ13 255 aaPredicted RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 IL1RL2Q9HB29 575 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.67□□□□□ -0.38
TCF4-289ENST00000637941 SEPT3Q9UH03 358 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 SUN2Q9UH99 717 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 LEF1Q9UJU2 399 aaPredicted RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 MRPL42Q9Y6G3 142 aaKnown RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 MYOCOSA0A1B0GUC4 107 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 TTC24A2A3L6 582 aaPredicted RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 SAC3D1A6NKF1 404 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 F5H5T6 163 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 H3BSA7 217 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 ARPC2O15144 300 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 SNAP91O60641 907 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 SNX2O60749 519 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 VPS26AO75436 327 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 EEDO75530 441 aaKnown RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 IGLV3-27P01718 113 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 CYBBP04839 570 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 SPATA31D3P0C874 917 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 CKMT2P17540 419 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 CD9P21926 228 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 CES1P23141 567 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 SLC6A2P23975 617 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 SLC5A2P31639 672 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 NUP107P57740 925 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 NKX3-2P78367 333 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 HPCAP84074 193 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 TIAL1Q01085 375 aaKnown RBP eCLIP12.67□□□□□ -0.38
TCF4-289ENST00000637941 MERTKQ12866 999 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 DCTN2Q13561 401 aaKnown RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 ATP6AP1Q15904 470 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 DDR2Q16832 855 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 PDCD4Q53EL6 469 aaKnown RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 FAM26DQ5JW98 314 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 SPATA31D4Q6ZUB0 917 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 PROSER1Q86XN7 944 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 COLGALT2Q8IYK4 626 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 TBC1D21Q8IYX1 336 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 CBR4Q8N4T8 237 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 SNX31Q8N9S9 440 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 TRPV1Q8NER1 839 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 CDK5RAP1Q96SZ6 601 aaKnown RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 ADI1Q9BV57 179 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 YTHDF1Q9BYJ9 559 aaKnown RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 MAGEH1Q9H213 219 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 DDX18Q9NVP1 670 aaKnown RBP12.67□□□□□ -0.38
TCF4-289ENST00000637941 AIG1Q9NVV5 245 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 CMTM6Q9NX76 183 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 PCDHA9Q9Y5H5 950 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 GPR45Q9Y5Y3 372 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 COMMD10Q9Y6G5 202 aa12.67□□□□□ -0.38
TCF4-289ENST00000637941 SLC12A8A0AV02 714 aa12.66□□□□□ -0.38
TCF4-289ENST00000637941 OR6C75A6NL08 312 aa12.66□□□□□ -0.38
TCF4-289ENST00000637941 TRIM64CA6NLI5 447 aa12.66□□□□□ -0.38
TCF4-289ENST00000637941 C2orf81A6NN90 581 aa12.66□□□□□ -0.38
TCF4-289ENST00000637941 FXYD1O00168 92 aa12.66□□□□□ -0.38
TCF4-289ENST00000637941 RASAL1O95294 804 aa12.66□□□□□ -0.38
TCF4-289ENST00000637941 ESRRBO95718 433 aa12.66□□□□□ -0.38
TCF4-289ENST00000637941 LINC00032P0C843 101 aa12.66□□□□□ -0.38
TCF4-289ENST00000637941 PRR35P0CG20 571 aa12.66□□□□□ -0.38
TCF4-289ENST00000637941 RCAN2Q14206 197 aa12.66□□□□□ -0.38
TCF4-289ENST00000637941 GALNT3Q14435 633 aa12.66□□□□□ -0.38
TCF4-289ENST00000637941 SEMA3AQ14563 771 aa12.66□□□□□ -0.38
TCF4-289ENST00000637941 IHHQ14623 411 aa12.66□□□□□ -0.38
TCF4-289ENST00000637941 TAF1AQ15573 450 aaPredicted RBP12.66□□□□□ -0.38
TCF4-289ENST00000637941 PITRM1Q5JRX3 1037 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms