RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 TDRD1Q9BXT4 1180 aaKnown RBP16.29■□□□□ 0.2
CLN3-255ENST00000637100 POLR1EQ9GZS1 481 aaKnown RBP16.29■□□□□ 0.2
CLN3-255ENST00000637100 UCK1Q9HA47 277 aa16.29■□□□□ 0.2
CLN3-255ENST00000637100 NT5MQ9NPB1 228 aa16.29■□□□□ 0.2
CLN3-255ENST00000637100 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.29■□□□□ 0.2
CLN3-255ENST00000637100 TBC1D29Q9UFV1 150 aa16.29■□□□□ 0.2
CLN3-255ENST00000637100 CD84Q9UIB8 345 aa16.29■□□□□ 0.2
CLN3-255ENST00000637100 ADGRG1Q9Y653 693 aa16.29■□□□□ 0.2
CLN3-255ENST00000637100 OAS3Q9Y6K5 1087 aaKnown RBP16.29■□□□□ 0.2
CLN3-255ENST00000637100 MN1Q10571 1320 aaPredicted RBP16.28■□□□□ 0.2
CLN3-255ENST00000637100 DOPEY2Q9Y3R5 2298 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 KIR2DS5A0A0G2JLQ3 304 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 A0A0G2JNG1 304 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 RGSL1A5PLK6 1076 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 PRR19A6NJB7 356 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 KIR2DS3K7RE56 304 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 MATN3O15232 486 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 MAP3K6O95382 1288 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 C9P02748 559 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 HHEXQ03014 270 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 GALNT2Q10471 571 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 CDC20Q12834 499 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 UBAP2LQ14157 1087 aaKnown RBP16.28■□□□□ 0.2
CLN3-255ENST00000637100 KIR2DS5Q14953 304 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 ASIC2Q16515 512 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 SMTNL2Q2TAL5 461 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 DOK6Q6PKX4 331 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 HERPUD2Q9BSE4 406 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 ANKMY1Q9P2S6 941 aa16.28■□□□□ 0.2
CLN3-255ENST00000637100 USP9YO00507 2555 aaPredicted RBP16.28■□□□□ 0.2
CLN3-255ENST00000637100 LILRA5A6NI73 299 aa16.27■□□□□ 0.2
CLN3-255ENST00000637100 OR5K4A6NMS3 321 aa16.27■□□□□ 0.2
CLN3-255ENST00000637100 F3P13726 295 aa16.27■□□□□ 0.2
CLN3-255ENST00000637100 CCNCP24863 283 aa16.27■□□□□ 0.2
CLN3-255ENST00000637100 MAN1A1P33908 653 aa16.27■□□□□ 0.2
CLN3-255ENST00000637100 GARSP41250 739 aaKnown RBP16.27■□□□□ 0.2
CLN3-255ENST00000637100 SKIDA1Q1XH10 827 aa16.27■□□□□ 0.2
CLN3-255ENST00000637100 FIGNQ5HY92 759 aa16.27■□□□□ 0.2
CLN3-255ENST00000637100 HGSNATQ68CP4 663 aa16.27■□□□□ 0.2
CLN3-255ENST00000637100 LYSMD3Q7Z3D4 306 aa16.27■□□□□ 0.2
CLN3-255ENST00000637100 ZNF761Q86XN6 746 aaPredicted RBP16.27■□□□□ 0.2
CLN3-255ENST00000637100 FAM129CQ86XR2 697 aa16.27■□□□□ 0.2
CLN3-255ENST00000637100 PTRH1Q86Y79 214 aaKnown RBP16.27■□□□□ 0.2
CLN3-255ENST00000637100 C9orf43Q8TAL5 461 aaPredicted RBP16.27■□□□□ 0.2
CLN3-255ENST00000637100 HSPH1Q92598 858 aa16.27■□□□□ 0.2
CLN3-255ENST00000637100 AHCYL2Q96HN2 611 aaKnown RBP16.27■□□□□ 0.2
CLN3-255ENST00000637100 BPIFA3Q9BQP9 254 aa16.27■□□□□ 0.2
CLN3-255ENST00000637100 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.27■□□□□ 0.2
CLN3-255ENST00000637100 GPN2Q9H9Y4 310 aaPredicted RBP16.27■□□□□ 0.2
CLN3-255ENST00000637100 APMAPQ9HDC9 416 aa16.27■□□□□ 0.2
CLN3-255ENST00000637100 RELNP78509 3460 aa16.27■□□□□ 0.19
CLN3-255ENST00000637100 NBASA2RRP1 2371 aa16.27■□□□□ 0.19
CLN3-255ENST00000637100 TRBV23OR9-2A0A075B6M9 112 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 GOLGA6CA6NDK9 693 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 GOLGA6BA6NDN3 693 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 GOLGA6L3A6NEY3 463 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 FADS2P1A8MWK0 482 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 TOX3O15405 576 aaPredicted RBP16.26■□□□□ 0.19
CLN3-255ENST00000637100 NUAK1O60285 661 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 STK17BO94768 372 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 CLDN7O95471 211 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 RECKO95980 971 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 GOLGA6DP0CG33 693 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 SLC2A4P14672 509 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 OAS2P29728 719 aaKnown RBP16.26■□□□□ 0.19
CLN3-255ENST00000637100 STAT5AP42229 794 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 SPINT3P49223 89 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 UBE2IP63279 158 aaKnown RBP16.26■□□□□ 0.19
CLN3-255ENST00000637100 MC1RQ01726 317 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 KLHL30Q0D2K2 578 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 MARK2Q7KZI7 788 aaKnown RBP16.26■□□□□ 0.19
CLN3-255ENST00000637100 SLC9B2Q86UD5 537 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 AOPEPQ8N6M6 819 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 AVL9Q8NBF6 648 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 APOBEC4Q8WW27 367 aaKnown RBP16.26■□□□□ 0.19
CLN3-255ENST00000637100 KIAA1143Q96AT1 154 aaPredicted RBP16.26■□□□□ 0.19
CLN3-255ENST00000637100 CARD9Q9H257 536 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 GOLGA6AQ9NYA3 693 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 MYO1AQ9UBC5 1043 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 ZNHIT2Q9UHR6 403 aa16.26■□□□□ 0.19
CLN3-255ENST00000637100 NBPF19A0A087WUL8 3843 aa16.25■□□□□ 0.19
CLN3-255ENST00000637100 USP9XQ93008 2570 aaPredicted RBP16.25■□□□□ 0.19
CLN3-255ENST00000637100 A0A1B0GTH6 734 aa16.25■□□□□ 0.19
CLN3-255ENST00000637100 GPR89AB7ZAQ6 455 aa16.25■□□□□ 0.19
CLN3-255ENST00000637100 ATP1A1P05023 1023 aaKnown RBP16.25■□□□□ 0.19
CLN3-255ENST00000637100 GPR89BP0CG08 455 aa16.25■□□□□ 0.19
CLN3-255ENST00000637100 XRCC1P18887 633 aaPredicted RBP16.25■□□□□ 0.19
CLN3-255ENST00000637100 CD97P48960 835 aa16.25■□□□□ 0.19
CLN3-255ENST00000637100 DSC2Q02487 901 aa16.25■□□□□ 0.19
CLN3-255ENST00000637100 NIPAL4Q0D2K0 466 aa16.25■□□□□ 0.19
CLN3-255ENST00000637100 MMRN1Q13201 1228 aa16.25■□□□□ 0.19
CLN3-255ENST00000637100 CCDC183Q5T5S1 534 aa16.25■□□□□ 0.19
CLN3-255ENST00000637100 NCBP2-AS2Q69YL0 99 aa16.25■□□□□ 0.19
CLN3-255ENST00000637100 TIGD7Q6NT04 549 aaPredicted RBP16.25■□□□□ 0.19
CLN3-255ENST00000637100 CHST15Q7LFX5 561 aaPredicted RBP16.25■□□□□ 0.19
CLN3-255ENST00000637100 NCSTNQ92542 709 aa16.25■□□□□ 0.19
CLN3-255ENST00000637100 FAF2Q96CS3 445 aa16.25■□□□□ 0.19
CLN3-255ENST00000637100 EID2BQ96D98 161 aa16.25■□□□□ 0.19
CLN3-255ENST00000637100 ABHD17AQ96GS6 310 aa16.25■□□□□ 0.19
CLN3-255ENST00000637100 CTRCQ99895 268 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms