RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 PLCL2Q9UPR0 1127 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 SERPINA3P01011 423 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 XKR4Q5GH76 650 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 PERM1Q5SV97 790 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 TTI2Q6NXR4 508 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 POLNQ7Z5Q5 900 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 ADGRG6Q86SQ4 1221 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 CERS2Q96G23 380 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 PHB2Q99623 299 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 TRMOQ9BU70 441 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 PTPRHQ9HD43 1115 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 TAS2R7Q9NYW3 318 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 SCGB2A1O75556 95 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 CBX6O95503 412 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 PSMD5Q16401 504 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 CRTC3Q6UUV7 619 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 REPS2Q8NFH8 660 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 DNASE1L2Q92874 299 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 ETNK2Q9NVF9 386 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 SIGLEC16A6NMB1 481 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 DDX3YO15523 660 aaKnown RBP13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 VGLL4Q14135 290 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 E2F2Q14209 437 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 OCLNQ16625 522 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 TDRPQ86YL5 185 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 DIRAS2Q96HU8 199 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 GORASP1Q9BQQ3 440 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 LGR4Q9BXB1 951 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 TMEM27Q9HBJ8 222 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 HMGXB4Q9UGU5 601 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 SLIT3O75094 1523 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 CCDC85CA6NKD9 419 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 FPGTO14772 594 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 ADH1AP07327 375 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 NPR2P20594 1047 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 RPL21P46778 160 aaKnown RBP13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZNF143P52747 638 aaPredicted RBP13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 LAPTM5Q13571 262 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 SLC41A1Q8IVJ1 513 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 TAS1R2Q8TE23 839 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 LRMDAQ9H2I8 198 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 PPEF2O14830 753 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 TFECO14948 347 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 PGRP06401 933 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 GLI1P08151 1106 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 TPH1P17752 444 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZNF670Q9BS34 389 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 GPRC5CQ9NQ84 441 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 SMPD4Q9NXE4 827 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 CAPN6Q9Y6Q1 641 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZBTB48P10074 688 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 AIF1P55008 147 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 PUS10Q3MIT2 529 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 FADS2P1A8MWK0 482 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 S100A12P80511 92 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 TMEM44Q2T9K0 475 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 EIF5AL1Q6IS14 154 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 CACUL1Q86Y37 369 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 IL1BP01584 269 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 NR2C1P13056 603 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 FAM13CQ8NE31 585 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 GLS2Q9UI32 602 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 SLC33A1O00400 549 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 PECAM1P16284 738 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 PAX7P23759 505 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 RAB26Q9ULW5 256 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 POLR3HQ9Y535 204 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 TMEM17Q86X19 198 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 TMCO6Q96DC7 493 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZDHHC9Q9Y397 364 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 PCDHGA10Q9Y5H3 936 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 AP5Z1O43299 807 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 MAGEA12P43365 314 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 MAPK10P53779 464 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 ROR2Q01974 943 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 GRB10Q13322 594 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 MTX3Q5HYI7 312 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZNF433Q8N7K0 673 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 NXPE2Q96DL1 559 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 FAM163AQ96GL9 167 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 MOV10Q9HCE1 1003 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 PCYOX1Q9UHG3 505 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 NUP50Q9UKX7 468 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 RAP2CQ9Y3L5 183 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 PEX16Q9Y5Y5 336 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 SPATA19Q7Z5L4 167 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 UNC93AQ86WB7 457 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 DNAJB14Q8TBM8 379 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 KLHL5Q96PQ7 755 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 CLIC5Q9NZA1 410 aa13.13□□□□□ -0.31
SYNGAP1-208ENST00000629380 IFNA7P01567 189 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 KLRK1P26718 216 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 SSR2P43308 183 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZNF234Q14588 700 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 ALG10Q5BKT4 473 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 KIAA1324Q6UXG2 1013 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 MBOAT7Q96N66 472 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 RBM47A0AV96 593 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 AZIN1O14977 448 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 DCLK1O15075 740 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms