RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 ADRA1DP25100 572 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 MGAT1P26572 445 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 EPHA8P29322 1005 aaPredicted RBP14.63□□□□□ -0.07
PNKP-221ENST00000627317 HADHAP40939 763 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 GRK6P43250 576 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 NPY2RP49146 381 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 THOP1P52888 689 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 ITGA8P53708 1063 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 MSLNQ13421 630 aaPredicted RBP14.63□□□□□ -0.07
PNKP-221ENST00000627317 PRAMEF14Q5SWL7 426 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 HENMT1Q5T8I9 393 aaKnown RBP14.63□□□□□ -0.07
PNKP-221ENST00000627317 PNCKQ6P2M8 343 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 CASC4Q6P4E1 433 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 KDM7AQ6ZMT4 941 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 Q6ZSR6 202 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 RAB44Q7Z6P3 723 aaPredicted RBP14.63□□□□□ -0.07
PNKP-221ENST00000627317 SLC22A18ASQ8N1D0 253 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 GPR26Q8NDV2 337 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 DNAJC1Q96KC8 554 aaKnown RBP14.63□□□□□ -0.07
PNKP-221ENST00000627317 BMFQ96LC9 184 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 PLEKHG4BQ96PX9 1271 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 RANBP9Q96S59 729 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 LRRC1Q9BTT6 524 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 ZSCAN5AQ9BUG6 496 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 FRMD8Q9BZ67 464 aaPredicted RBP14.63□□□□□ -0.07
PNKP-221ENST00000627317 L2HGDHQ9H9P8 463 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 PHPT1Q9NRX4 125 aaPredicted RBP14.63□□□□□ -0.07
PNKP-221ENST00000627317 SAMD15Q9P1V8 674 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 TCAF1Q9Y4C2 921 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 OR1A2Q9Y585 309 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 KCTD3Q9Y597 815 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 PCNX2A6NKB5 2137 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 COL5A1P20908 1838 aaPredicted RBP14.62□□□□□ -0.07
PNKP-221ENST00000627317 GLYATL1P3A0A0U1RQE8 302 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 K7ESM1 405 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 CACNB4O00305 520 aaPredicted RBP14.62□□□□□ -0.07
PNKP-221ENST00000627317 TOR1BO14657 336 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 YKT6O15498 198 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 FTH1P19P0C7X4 201 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 SPINK2P20155 84 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 TEAD1P28347 426 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 MAP1BP46821 2468 aaKnown RBP14.62□□□□□ -0.07
PNKP-221ENST00000627317 PFN3P60673 137 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 YPEL5P62699 121 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 CRADDP78560 199 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 TMPRSS15P98073 1019 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 SLC7A5Q01650 507 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 FOXC1Q12948 553 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 PTPRCAPQ14761 206 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 DNAJC21Q5F1R6 531 aaKnown RBP14.62□□□□□ -0.07
PNKP-221ENST00000627317 PCID2Q5JVF3 399 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 DUPD1Q68J44 220 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 HIBCHQ6NVY1 386 aaPredicted RBP14.62□□□□□ -0.07
PNKP-221ENST00000627317 FAM151BQ6UXP7 276 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 ADAMTSL4Q6UY14 1074 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 NLRP9Q7RTR0 991 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 SLCO6A1Q86UG4 719 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 CAND1Q86VP6 1230 aaKnown RBP14.62□□□□□ -0.07
PNKP-221ENST00000627317 NLRP8Q86W28 1048 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 HEATR4Q86WZ0 1026 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 DCP2Q8IU60 420 aaKnown RBP14.62□□□□□ -0.07
PNKP-221ENST00000627317 PELI3Q8N2H9 469 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 OR13C4Q8NGS5 318 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 STYXQ8WUJ0 223 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 PTCD2Q8WV60 388 aaKnown RBP14.62□□□□□ -0.07
PNKP-221ENST00000627317 APOOQ9BUR5 198 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 SYBUQ9NX95 663 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 WHRNQ9P202 907 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 FKBPLQ9UIM3 349 aa14.62□□□□□ -0.07
PNKP-221ENST00000627317 FAM221BA6H8Z2 402 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 MROH6A6NGR9 719 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 HYAL3O43820 417 aaPredicted RBP14.61□□□□□ -0.07
PNKP-221ENST00000627317 AVILO75366 819 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 HTR1BP28222 390 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 KIAA1024LP59773 190 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 PDE1CQ14123 709 aaPredicted RBP14.61□□□□□ -0.07
PNKP-221ENST00000627317 PTK2BQ14289 1009 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 SUZ12Q15022 739 aaKnown RBP14.61□□□□□ -0.07
PNKP-221ENST00000627317 SKIDA1Q1XH10 827 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 GLE1Q53GS7 698 aaKnown RBP14.61□□□□□ -0.07
PNKP-221ENST00000627317 TSTD2Q5T7W7 516 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 PDPK2PQ6A1A2 396 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 GATAD2AQ86YP4 633 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 PDIK1LQ8N165 341 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 OXR1Q8N573 874 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 TRAM1L1Q8N609 369 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 RHBDD1Q8TEB9 315 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 SETD7Q8WTS6 366 aaKnown RBP14.61□□□□□ -0.07
PNKP-221ENST00000627317 ADAMTS14Q8WXS8 1223 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 AGAP2Q99490 1192 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 CDC6Q99741 560 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 C19orf43Q9BQ61 176 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 IL26Q9NPH9 171 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 NLE1Q9NVX2 485 aaPredicted RBP14.61□□□□□ -0.07
PNKP-221ENST00000627317 APPL1Q9UKG1 709 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 RIMKLBQ9ULI2 386 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 TP53BP1Q12888 1972 aaPredicted RBP14.61□□□□□ -0.07
PNKP-221ENST00000627317 CABIN1Q9Y6J0 2220 aa14.61□□□□□ -0.07
PNKP-221ENST00000627317 SDR42E2A6NKP2 422 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 FADS2P1A8MWK0 482 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms