RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 VOPP1Q96AW1 172 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 FAF2Q96CS3 445 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 HDAC11Q96DB2 347 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 SCRN2Q96FV2 425 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 WDR92Q96MX6 357 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 TCF12Q99081 682 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 FERMT1Q9BQL6 677 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 APOOQ9BUR5 198 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 BRD8Q9H0E9 1235 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 GPR27Q9NS67 375 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 UCKL1Q9NWZ5 548 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 GOLGA6AQ9NYA3 693 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 DTLQ9NZJ0 730 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 SEPT10Q9P0V9 454 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 B4GALT6Q9UBX8 382 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 KLQ9UEF7 1012 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 APOBEC3BQ9UH17 382 aaKnown RBP6.4□□□□□ -1.38
TCF4-249ENST00000625716 DNPEPQ9ULA0 475 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 HYOU1Q9Y4L1 999 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 OR1A2Q9Y585 309 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 RAI2Q9Y5P3 530 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 ALG6Q9Y672 507 aa6.4□□□□□ -1.38
TCF4-249ENST00000625716 EPN1Q9Y6I3 576 aaPredicted RBP6.4□□□□□ -1.38
TCF4-249ENST00000625716 FRYLO94915 3013 aa6.4□□□□□ -1.39
TCF4-249ENST00000625716 CACNA1AO00555 2505 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 CPED1A4D0V7 1026 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 SOWAHDA6NJG2 315 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 K7ESM1 405 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 KCNK1O00180 336 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 PSMD11O00231 422 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 TPP1O14773 563 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 HEXIM1O94992 359 aaKnown RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 ZRANB2O95218 330 aaKnown RBP eCLIP6.39□□□□□ -1.39
TCF4-249ENST00000625716 NDUFA10O95299 355 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 PTMAP06454 111 aaKnown RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 CKMT1AP12532 417 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 CTPS1P17812 591 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 ADMP35318 185 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 NR2C2P49116 596 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 ACADVLP49748 655 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 HK3P52790 923 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 HADHBP55084 474 aaKnown RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 KIAA1024LP59773 190 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 SRP54P61011 504 aaKnown RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 RPL26P61254 145 aaKnown RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 DSC2Q02487 901 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 GSTM4Q03013 218 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 PPIDQ08752 370 aaKnown RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 SLC10A2Q12908 348 aaPredicted RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 EIF2B5Q13144 721 aaKnown RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 C1orf61Q13536 156 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 NFATC4Q14934 902 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 NR0B2Q15466 257 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 SMAD1Q15797 465 aaKnown RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 SPRED3Q2MJR0 410 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 DEFB133Q30KQ1 61 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 TPRG1LQ5T0D9 272 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 KAZNQ674X7 775 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 SLC9A4Q6AI14 798 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 C11orf63Q6NUN7 778 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 PNCKQ6P2M8 343 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 SPOCD1Q6ZMY3 1216 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 KIAA1328Q86T90 577 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 GKN2Q86XP6 184 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 SDR16C5Q8N3Y7 309 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 PLD5Q8N7P1 536 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 FAM181AQ8N9Y4 354 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 PLA2G15Q8NCC3 412 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 LPCAT1Q8NF37 534 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 OR56A4Q8NGH8 313 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 CCHCR1Q8TD31 782 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 FBLIM1Q8WUP2 373 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 ZCCHC14Q8WYQ9 949 aaKnown RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 P3H4Q92791 437 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 GATA6Q92908 595 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 TSACCQ96A04 125 aaPredicted RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 NUS1Q96E22 293 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 RBM41Q96IZ5 413 aaKnown RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 APOLD1Q96LR9 279 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 TBATAQ96M53 351 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 LGMNQ99538 433 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 BAG1Q99933 345 aaPredicted RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 ADGRE3Q9BY15 652 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 CCDC86Q9H6F5 360 aaKnown RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 WDR26Q9H7D7 661 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 PCDH9Q9HC56 1237 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 PHPT1Q9NRX4 125 aaPredicted RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 IMPACTQ9P2X3 320 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 GULP1Q9UBP9 304 aa6.39□□□□□ -1.39
TCF4-249ENST00000625716 RPL26L1Q9UNX3 145 aaKnown RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 ASCC3Q8N3C0 2202 aaKnown RBP6.39□□□□□ -1.39
TCF4-249ENST00000625716 CHD5Q8TDI0 1954 aa6.38□□□□□ -1.39
TCF4-249ENST00000625716 DMXL1Q9Y485 3027 aa6.38□□□□□ -1.39
TCF4-249ENST00000625716 DNAH14Q0VDD8 3507 aa6.38□□□□□ -1.39
TCF4-249ENST00000625716 A0A0J9YYE9 177 aa6.38□□□□□ -1.39
TCF4-249ENST00000625716 FAM149AA5PLN7 773 aa6.38□□□□□ -1.39
TCF4-249ENST00000625716 NPIPB15A6NHN6 443 aaPredicted RBP6.38□□□□□ -1.39
TCF4-249ENST00000625716 C3orf70A6NLC5 250 aaPredicted RBP6.38□□□□□ -1.39
TCF4-249ENST00000625716 LMO7DNF2Z398 122 aa6.38□□□□□ -1.39
TCF4-249ENST00000625716 TNFRSF10CO14798 259 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms