RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ZNF592Q92610 1267 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 SCARF2Q96GP6 870 aaPredicted RBP14.21□□□□□ -0.13
CBWD3-217ENST00000621474 HIC2Q96JB3 615 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 KRT12Q99456 494 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 TRIM51Q9BSJ1 452 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 LRRC61Q9BV99 259 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 PHPT1Q9NRX4 125 aaPredicted RBP14.21□□□□□ -0.13
CBWD3-217ENST00000621474 RAD18Q9NS91 495 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 KLQ9UEF7 1012 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 CDV3Q9UKY7 258 aaKnown RBP14.21□□□□□ -0.13
CBWD3-217ENST00000621474 GLYATL1P3A0A0U1RQE8 302 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 PRSS38A1L453 326 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 AGAP14A8MT82 685 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 H7C0S8 307 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 TNFRSF10CO14798 259 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 SCAMP1O15126 338 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 YKT6O15498 198 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 SH3BP5O60239 455 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 AVILO75366 819 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 URI1O94763 535 aaPredicted RBP14.2□□□□□ -0.14
CBWD3-217ENST00000621474 TUBB4AP04350 444 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 CELA2BP08218 269 aaPredicted RBP14.2□□□□□ -0.14
CBWD3-217ENST00000621474 CRADDP78560 199 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 TMPRSS15P98073 1019 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 PPARDQ03181 441 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 CHRNA6Q15825 494 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 PDPK2PQ6A1A2 396 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 LRRC8BQ6P9F7 803 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 AGGF1Q8N302 714 aaeCLIP14.2□□□□□ -0.14
CBWD3-217ENST00000621474 ZNF548Q8NEK5 533 aaPredicted RBP14.2□□□□□ -0.14
CBWD3-217ENST00000621474 BAHD1Q8TBE0 780 aaPredicted RBP14.2□□□□□ -0.14
CBWD3-217ENST00000621474 BTN2A2Q8WVV5 523 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 GLYATL1Q969I3 302 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 RUNDC3BQ96NL0 473 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 CAMK1GQ96NX5 476 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 VPS35Q96QK1 796 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 RANBP9Q96S59 729 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 CLPBQ9H078 707 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 ARFGAP3Q9NP61 516 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 TMEM98Q9Y2Y6 226 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 ST14Q9Y5Y6 855 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 MRFAP1Q9Y605 127 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 PIKFYVEQ9Y2I7 2098 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 WDFY3Q8IZQ1 3526 aa14.2□□□□□ -0.14
CBWD3-217ENST00000621474 CCDC78A2IDD5 438 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 KIF2AO00139 706 aaPredicted RBP14.19□□□□□ -0.14
CBWD3-217ENST00000621474 DNALI1O14645 258 aaPredicted RBP14.19□□□□□ -0.14
CBWD3-217ENST00000621474 UGT1A9O60656 530 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 DNAJC6O75061 913 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 PRAMEF1O95521 474 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 UGT1A6P19224 532 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 UGT1A1P22309 533 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 UGT1A4P22310 534 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 UGT1A3P35503 534 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 UGT1A5P35504 534 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 MAGEA3P43357 314 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 ARSDP51689 593 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 SESN2P58004 480 aaPredicted RBP14.19□□□□□ -0.14
CBWD3-217ENST00000621474 HNRNPKP61978 463 aaKnown RBP eCLIP14.19□□□□□ -0.14
CBWD3-217ENST00000621474 PDE1BQ01064 536 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 SEPT6Q14141 434 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 DHX34Q14147 1143 aaKnown RBP14.19□□□□□ -0.14
CBWD3-217ENST00000621474 ZNF648Q5T619 568 aaPredicted RBP14.19□□□□□ -0.14
CBWD3-217ENST00000621474 ZDHHC20Q5W0Z9 365 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 HID1Q8IV36 788 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 MCUQ8NE86 351 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 STYXQ8WUJ0 223 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 SERPINB12Q96P63 405 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 UGT1A7Q9HAW7 530 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 UGT1A10Q9HAW8 530 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 UGT1A8Q9HAW9 530 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 NLE1Q9NVX2 485 aaPredicted RBP14.19□□□□□ -0.14
CBWD3-217ENST00000621474 SLC2A6Q9UGQ3 507 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 APOBEC3BQ9UH17 382 aaKnown RBP14.19□□□□□ -0.14
CBWD3-217ENST00000621474 ASIC3Q9UHC3 531 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 PCOLCE2Q9UKZ9 415 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 SUFUQ9UMX1 484 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 SPTBN2O15020 2390 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 GOLGA8MH3BSY2 632 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 FLRT2O43155 660 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 RAD51CO43502 376 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 MTX2O75431 263 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 SRP72O76094 671 aaKnown RBP14.19□□□□□ -0.14
CBWD3-217ENST00000621474 KELP23276 732 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 ADRA1DP25100 572 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 ACVR1Q04771 509 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 NFATC2Q13469 925 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 C1orf61Q13536 156 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 PRRT3Q5FWE3 981 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 DOK6Q6PKX4 331 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 SYDE1Q6ZW31 735 aaPredicted RBP14.19□□□□□ -0.14
CBWD3-217ENST00000621474 RD3Q7Z3Z2 195 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 NAXDQ8IW45 347 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 PPIL6Q8IXY8 311 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 MPP5Q8N3R9 675 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 CCDC97Q96F63 343 aaPredicted RBP14.19□□□□□ -0.14
CBWD3-217ENST00000621474 CDKN2AIPNLQ96HQ2 116 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 TBATAQ96M53 351 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 SUDS3Q9H7L9 328 aaPredicted RBP14.19□□□□□ -0.14
CBWD3-217ENST00000621474 CYP4F12Q9HCS2 524 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms