RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ZNF662Q6ZS27 426 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 ASB18Q6ZVZ8 466 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 QRFPRQ96P65 431 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 DNAJC18Q9H819 358 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 C8BP07358 591 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 CREB5Q02930 508 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 SIM2Q14190 667 aaPredicted RBP14.97□□□□□ -0.01
COL5A1-208ENST00000618395 KLHL22Q53GT1 634 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 AGPAT3Q9NRZ7 376 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 TBX2Q13207 712 aaPredicted RBP14.97□□□□□ -0.01
COL5A1-208ENST00000618395 SMARCD1Q96GM5 515 aa14.97□□□□□ -0.01
COL5A1-208ENST00000618395 NXF3Q9H4D5 531 aaKnown RBP14.97□□□□□ -0.01
COL5A1-208ENST00000618395 ZNF214Q9UL59 606 aaPredicted RBP14.97□□□□□ -0.01
COL5A1-208ENST00000618395 ARHGEF40Q8TER5 1519 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 DCLK1O15075 740 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 DBIP07108 87 aaKnown RBP14.96□□□□□ -0.01
COL5A1-208ENST00000618395 DDX6P26196 483 aaKnown RBP eCLIP14.96□□□□□ -0.01
COL5A1-208ENST00000618395 PSMA6P60900 246 aaKnown RBP14.96□□□□□ -0.01
COL5A1-208ENST00000618395 HTR3CQ8WXA8 447 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 SLITRK5O94991 958 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 AMPD1P23109 780 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 ALDH3B2P48448 385 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 ABCA11PQ4W5N1 156 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 ATP6V0D2Q8N8Y2 350 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 FUZQ9BT04 418 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 ABCD2Q9UBJ2 740 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 A0A087WZ62 844 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 HACD1B0YJ81 288 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 ISM1B1AKI9 464 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 NMT2O60551 498 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 CD44P16070 742 aaKnown RBP14.96□□□□□ -0.01
COL5A1-208ENST00000618395 PCDH1Q08174 1060 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 ALG9Q9H6U8 611 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 UFSP2Q9NUQ7 469 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 DNAJC28Q9NX36 388 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 TRHDEQ9UKU6 1024 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 WDR62O43379 1518 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 SLC25A12O75746 678 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 IFNA21P01568 189 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 LINGO3P0C6S8 592 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 NAE1Q13564 534 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 GTF2IRD2BQ6EKJ0 949 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 GTF2IRD2Q86UP8 949 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 FAM98AQ8NCA5 519 aaKnown RBP14.96□□□□□ -0.01
COL5A1-208ENST00000618395 SMG8Q8ND04 991 aaKnown RBP14.96□□□□□ -0.01
COL5A1-208ENST00000618395 TTYH2Q9BSA4 534 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 ERVK-5Q9HDB9 667 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 KLQ9UEF7 1012 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 EIF2B4Q9UI10 523 aaKnown RBP14.96□□□□□ -0.01
COL5A1-208ENST00000618395 LRRC42Q9Y546 428 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 WASF2Q9Y6W5 498 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 GMDSO60547 372 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 RASGRP1O95267 797 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 EVI2BP34910 448 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 MYL6P60660 151 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 TGFBIQ15582 683 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 ZNF404Q494X3 552 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 GLYATQ6IB77 296 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 TPGS1Q6ZTW0 290 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 ARL5AQ9Y689 179 aa14.96□□□□□ -0.01
COL5A1-208ENST00000618395 TPPPO94811 219 aa14.96□□□□□ -0.02
COL5A1-208ENST00000618395 F9P00740 461 aa14.96□□□□□ -0.02
COL5A1-208ENST00000618395 FABP3P05413 133 aa14.96□□□□□ -0.02
COL5A1-208ENST00000618395 FMO4P31512 558 aa14.96□□□□□ -0.02
COL5A1-208ENST00000618395 MERTKQ12866 999 aa14.96□□□□□ -0.02
COL5A1-208ENST00000618395 ZC3HC1Q86WB0 502 aaKnown RBP14.96□□□□□ -0.02
COL5A1-208ENST00000618395 NXPE2Q96DL1 559 aa14.96□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF354BQ96LW1 612 aa14.96□□□□□ -0.02
COL5A1-208ENST00000618395 PIDD1Q9HB75 910 aa14.96□□□□□ -0.02
COL5A1-208ENST00000618395 CRYL1Q9Y2S2 319 aa14.96□□□□□ -0.02
COL5A1-208ENST00000618395 SLC28A1O00337 649 aa14.96□□□□□ -0.02
COL5A1-208ENST00000618395 VILLO15195 856 aa14.96□□□□□ -0.02
COL5A1-208ENST00000618395 TCF7P36402 384 aaPredicted RBP14.96□□□□□ -0.02
COL5A1-208ENST00000618395 FADDQ13158 208 aa14.96□□□□□ -0.02
COL5A1-208ENST00000618395 CDADC1Q9BWV3 514 aa14.96□□□□□ -0.02
COL5A1-208ENST00000618395 FAM126AQ9BYI3 521 aaPredicted RBP14.96□□□□□ -0.02
COL5A1-208ENST00000618395 GPR162Q16538 588 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF730Q6ZMV8 503 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 TNS4Q8IZW8 715 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 POC1BQ8TC44 478 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 CCDC3Q9BQI4 270 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 HMBSP08397 361 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 CDH15P55291 814 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 FGL1Q08830 312 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 PPP2R2DQ66LE6 453 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 CIAPIN1Q6FI81 312 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 DGLUCYQ7Z3D6 616 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 SLC7A5P1Q8MH63 180 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 CYP4X1Q8N118 509 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 ART4Q93070 314 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 NT5MQ9NPB1 228 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 ACSL5Q9ULC5 683 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 CMAHPQ9Y471 501 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 PCDHGB6Q9Y5F9 930 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 BPNT1O95861 308 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 APBA3O96018 575 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 ENTPD1P49961 510 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 MECP2P51608 486 aaKnown RBP14.95□□□□□ -0.02
COL5A1-208ENST00000618395 E2F1Q01094 437 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 GHDCQ8N2G8 530 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms