RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 RRAGCQ9HB90 399 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 EIF2B3Q9NR50 452 aaKnown RBP11.73□□□□□ -0.53
CDH5-208ENST00000614547 CCM2LQ9NUG4 571 aaPredicted RBP11.73□□□□□ -0.53
CDH5-208ENST00000614547 POU2F3Q9UKI9 436 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 NPHS1O60500 1241 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 MGEA5O60502 916 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 SERPINB7O75635 380 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 LGALS2P05162 132 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 AGXTP21549 392 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 ADCYAP1R1P41586 468 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 SERPINH1P50454 418 aaKnown RBP11.73□□□□□ -0.53
CDH5-208ENST00000614547 LRP8Q14114 963 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 SV2CQ496J9 727 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 NHSL2Q5HYW2 709 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 C9orf57Q5W0N0 161 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 TTC23Q5W5X9 447 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 NOTUMQ6P988 496 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 OR10A6Q8NH74 314 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.73□□□□□ -0.53
CDH5-208ENST00000614547 OSBPL2Q9H1P3 480 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 TOR3AQ9H497 397 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 CASS4Q9NQ75 786 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 ADGRE2Q9UHX3 823 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 GNPTGQ9UJJ9 305 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 CLASP2O75122 1294 aaKnown RBP11.73□□□□□ -0.53
CDH5-208ENST00000614547 ABCB1P08183 1280 aaPredicted RBP11.73□□□□□ -0.53
CDH5-208ENST00000614547 SLC2A3P11169 496 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 CD68P34810 354 aaPredicted RBP11.73□□□□□ -0.53
CDH5-208ENST00000614547 ENPEPQ07075 957 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 TARBP2Q15633 366 aaKnown RBP11.73□□□□□ -0.53
CDH5-208ENST00000614547 DSG4Q86SJ6 1040 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 AKAP14Q86UN6 197 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 UBE2J2Q8N2K1 259 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 MCOLN3Q8TDD5 553 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 ACDQ96AP0 544 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 FUNDC2Q9BWH2 189 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 RNF39Q9H2S5 420 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 ENTPD7Q9NQZ7 604 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 RIC8BQ9NVN3 520 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 DUS2Q9NX74 493 aaKnown RBP11.73□□□□□ -0.53
CDH5-208ENST00000614547 CMTM6Q9NX76 183 aa11.73□□□□□ -0.53
CDH5-208ENST00000614547 SCAMP3O14828 347 aaKnown RBP11.72□□□□□ -0.53
CDH5-208ENST00000614547 NDUFS2O75306 463 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 CD4P01730 458 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 SCAIQ8N9R8 606 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 CNIH3Q8TBE1 160 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 TMEM174Q8WUU8 243 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 DNAJB3Q8WWF6 145 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 KHSRPQ92945 711 aaKnown RBP eCLIP11.72□□□□□ -0.53
CDH5-208ENST00000614547 TRMT13Q9NUP7 481 aaKnown RBP11.72□□□□□ -0.53
CDH5-208ENST00000614547 ZNHIT2Q9UHR6 403 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 LEF1Q9UJU2 399 aaPredicted RBP11.72□□□□□ -0.53
CDH5-208ENST00000614547 TCAF1Q9Y4C2 921 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 B3GAT3O94766 335 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 PGLSO95336 258 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 ST13P50502 369 aaKnown RBP11.72□□□□□ -0.53
CDH5-208ENST00000614547 OR4D2P58180 307 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 DSC2Q02487 901 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 PRAMEF19Q5SWL8 479 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 MARC1Q5VT66 337 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 HORMAD1Q86X24 394 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 EID3Q8N140 333 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 ZFP90Q8TF47 636 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 RSPH1Q8WYR4 309 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 FAM120BQ96EK7 910 aaKnown RBP11.72□□□□□ -0.53
CDH5-208ENST00000614547 MYOCQ99972 504 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 CEP44Q9C0F1 390 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 BPIFA1Q9NP55 256 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 VPS4AQ9UN37 437 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 MYBPHLA2RUH7 354 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 TNPO2O14787 897 aaKnown RBP11.72□□□□□ -0.53
CDH5-208ENST00000614547 TSPAN1O60635 241 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 CELF2O95319 508 aaKnown RBP11.72□□□□□ -0.53
CDH5-208ENST00000614547 AZGP1P25311 298 aaKnown RBP11.72□□□□□ -0.53
CDH5-208ENST00000614547 MAGEA6P43360 314 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 TRAF3Q13114 568 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 SPCS2Q15005 226 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 TSNQ15631 228 aaKnown RBP11.72□□□□□ -0.53
CDH5-208ENST00000614547 MRNIPQ6NTE8 343 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 ELMSAN1Q6PJG2 1045 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 AHSA2Q719I0 299 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 ANKRD46Q86W74 232 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 TMEM126BQ8IUX1 230 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 RANBP9Q96S59 729 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 SIAEQ9HAT2 523 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 UXTQ9UBK9 157 aaPredicted RBP11.72□□□□□ -0.53
CDH5-208ENST00000614547 INVSQ9Y283 1065 aa11.72□□□□□ -0.53
CDH5-208ENST00000614547 POLR3HQ9Y535 204 aaPredicted RBP11.72□□□□□ -0.53
CDH5-208ENST00000614547 PFDN6O15212 129 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 IDH3BO43837 385 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 SOAT2O75908 522 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 CCNKO75909 580 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 ANGPTL1O95841 491 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 ANXA6P08133 673 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 TGFB3P10600 412 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 EFNA1P20827 205 aaPredicted RBP11.71□□□□□ -0.53
CDH5-208ENST00000614547 GTF2E2P29084 291 aaKnown RBP11.71□□□□□ -0.53
CDH5-208ENST00000614547 ICAM3P32942 547 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 IDH2P48735 452 aaKnown RBP11.71□□□□□ -0.53
CDH5-208ENST00000614547 POLR2JP52435 117 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms