RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 RIMKLBQ9ULI2 386 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 UTP11Q9Y3A2 253 aaKnown RBP13.17□□□□□ -0.3
MDC1-209ENST00000613547 SLC30A1Q9Y6M5 507 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 CACNA1EQ15878 2313 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 PLXNA2O75051 1894 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 WDR87Q6ZQQ6 2873 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 PRSS38A1L453 326 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 MAGEB16A2A368 324 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 NEMP2A6NFY4 417 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 TMEM202A6NGA9 273 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 MROH6A6NGR9 719 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 FADS2P1A8MWK0 482 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 FLRT2O43155 660 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 RAD51CO43502 376 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 SRP72O76094 671 aaKnown RBP13.16□□□□□ -0.3
MDC1-209ENST00000613547 TNFP01375 233 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 CTSEP14091 401 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 HK3P52790 923 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 TMPRSS15P98073 1019 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 IL9RQ01113 521 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 EIF2B5Q13144 721 aaKnown RBP13.16□□□□□ -0.3
MDC1-209ENST00000613547 PTPRCAPQ14761 206 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 CHRNA6Q15825 494 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 ALG11Q2TAA5 492 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 GPR33Q49SQ1 333 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 ATP13A5Q4VNC0 1218 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 CCDC38Q502W7 563 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 ZNF542PQ5EBM4 170 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 LDLRAP1Q5SW96 308 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 TSTD2Q5T7W7 516 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 CASC4Q6P4E1 433 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 RD3Q7Z3Z2 195 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 FSTL5Q8N475 847 aaPredicted RBP13.16□□□□□ -0.3
MDC1-209ENST00000613547 ZNF398Q8TD17 642 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 TSACCQ96A04 125 aaPredicted RBP13.16□□□□□ -0.3
MDC1-209ENST00000613547 ULK4Q96C45 1275 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 COX14Q96I36 57 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 TBATAQ96M53 351 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 ERP44Q9BS26 406 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 ASB8Q9H765 288 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 FGF22Q9HCT0 170 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 SMOXQ9NWM0 555 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 ANAPC5Q9UJX4 755 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 SLC17A4Q9Y2C5 497 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 TCAF1Q9Y4C2 921 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 DGKBQ9Y6T7 804 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 DMDP11532 3685 aa13.16□□□□□ -0.3
MDC1-209ENST00000613547 CCDC78A2IDD5 438 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 SDR42E2A6NKP2 422 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 ESPNB1AK53 854 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 GPR89AB7ZAQ6 455 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 H7C0S8 307 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 VEGFDO43915 354 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 ZNF500O60304 480 aaPredicted RBP13.15□□□□□ -0.3
MDC1-209ENST00000613547 SDC3O75056 442 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 PIAS2O75928 621 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 SEC31AO94979 1220 aaKnown RBP13.15□□□□□ -0.3
MDC1-209ENST00000613547 GPR89BP0CG08 455 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 ALPPL2P10696 532 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 IVDP26440 423 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 MGAT1P26572 445 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 MC4RP32245 332 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 GRK6P43250 576 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 PRAMEP78395 509 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 NFATC2Q13469 925 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 GTF2H3Q13889 308 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 ELOCQ15369 112 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 DNAJC21Q5F1R6 531 aaKnown RBP13.15□□□□□ -0.3
MDC1-209ENST00000613547 ZRANB3Q5FWF4 1079 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 ZNF534Q76KX8 674 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 SNX20Q7Z614 316 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 TRIM74Q86UV6 250 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 PDIK1LQ8N165 341 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 SAP25Q8TEE9 199 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 OR1E3Q8WZA6 343 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.15□□□□□ -0.31e-6■■■■■ 31.4
MDC1-209ENST00000613547 PDXPQ96GD0 296 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 CDKN2AIPNLQ96HQ2 116 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 SERPINB12Q96P63 405 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 TTC1Q99614 292 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 RMI1Q9H9A7 625 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 CARS2Q9HA77 564 aaKnown RBP13.15□□□□□ -0.3
MDC1-209ENST00000613547 MRM3Q9HC36 420 aaKnown RBP13.15□□□□□ -0.3
MDC1-209ENST00000613547 TRIM39Q9HCM9 518 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 CYP4F12Q9HCS2 524 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 CRLS1Q9UJA2 301 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 TMEM98Q9Y2Y6 226 aa13.15□□□□□ -0.3
MDC1-209ENST00000613547 PCDH15Q96QU1 1955 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 SLC30A4O14863 429 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 AQP9O43315 295 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 UGT1A9O60656 530 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 AVILO75366 819 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 CEACAM5P06731 702 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 IVLP07476 585 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 RALBP11234 206 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 PAMP19021 973 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 UGT1A6P19224 532 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 UGT1A1P22309 533 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 UGT1A4P22310 534 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 DGKAP23743 735 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms