RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 RPL26P61254 145 aaKnown RBP13.98□□□□□ -0.17
COL6A1-207ENST00000612273 MRNIPQ6NTE8 343 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 PPP4R4Q6NUP7 873 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 DUS1LQ6P1R4 473 aaKnown RBP13.98□□□□□ -0.17
COL6A1-207ENST00000612273 FAM171BQ6P995 826 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 ZNF467Q7Z7K2 595 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-207ENST00000612273 HS3ST5Q8IZT8 346 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 BPIFB6Q8NFQ5 453 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 OR52B6Q8NGF0 335 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 OR4L1Q8NH43 312 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 GABPB2Q8TAK5 448 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-207ENST00000612273 HGH1Q9BTY7 390 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 VPS45Q9NRW7 570 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 CATSPERZQ9NTU4 200 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 CCM2LQ9NUG4 571 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-207ENST00000612273 NUP214P35658 2090 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-207ENST00000612273 DLGAP1O14490 977 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 GPR182O15218 404 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 ECI2O75521 394 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 CCR3P51677 355 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 TPD52P55327 224 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-207ENST00000612273 IL1RL1Q01638 556 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 MAP2K5Q13163 448 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 TAS2R42Q7RTR8 314 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 STK32CQ86UX6 486 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 CLEC4FQ8N1N0 589 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 PARK7Q99497 189 aaKnown RBP13.98□□□□□ -0.17
COL6A1-207ENST00000612273 SGIP1Q9BQI5 828 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 CCDC154A6NI56 674 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 NT5C1B-RDH14C9J2C7 533 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 BOLA2-SMG1P6H3BVE0 249 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 SLC7A4O43246 635 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 SYNCRIPO60506 623 aaKnown RBP13.97□□□□□ -0.17
COL6A1-207ENST00000612273 CDK9P50750 372 aaKnown RBP13.97□□□□□ -0.17
COL6A1-207ENST00000612273 OR4D2P58180 307 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 TRAP1Q12931 704 aaKnown RBP13.97□□□□□ -0.17
COL6A1-207ENST00000612273 ZRANB3Q5FWF4 1079 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 FAM45BPQ6NSW5 357 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 MILR1Q7Z6M3 343 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 DHRSXQ8N5I4 330 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 FAM45AQ8TCE6 357 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 SERPINB11Q96P15 392 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 NACA2Q9H009 215 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 ING2Q9H160 280 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 ABCG8Q9H221 673 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 PLK2Q9NYY3 685 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 SPO11Q9Y5K1 396 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 U3KQV3 271 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 OTOFQ9HC10 1997 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 MOXD2PA6NHM9 499 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 FFAR3O14843 346 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 GPR42O15529 346 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 ZNF182P17025 639 aaPredicted RBP13.97□□□□□ -0.17
COL6A1-207ENST00000612273 RGRP47804 291 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 EMP3P54852 163 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 SH3BGRP55822 239 aaPredicted RBP13.97□□□□□ -0.17
COL6A1-207ENST00000612273 CREB5Q02930 508 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 TRAF2Q12933 501 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 FOXD4Q12950 439 aaPredicted RBP13.97□□□□□ -0.17
COL6A1-207ENST00000612273 ATP1A4Q13733 1029 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 PCBP1Q15365 356 aaKnown RBP eCLIP13.97□□□□□ -0.17
COL6A1-207ENST00000612273 IMPG1Q17R60 797 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 FAM110CQ1W6H9 321 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 MANEALQ5VSG8 457 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 LINGO4Q6UY18 593 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 TMEM126BQ8IUX1 230 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 ADGRG5Q8IZF4 528 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 LPCAT1Q8NF37 534 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 FBXO30Q8TB52 745 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 ARRDC2Q8TBH0 407 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 PTCD2Q8WV60 388 aaKnown RBP13.97□□□□□ -0.17
COL6A1-207ENST00000612273 IRGQQ8WZA9 623 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 FBXO32Q969P5 355 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 ZBED2Q9BTP6 218 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 ANKRD60Q9BZ19 345 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 RPF2Q9H7B2 306 aaKnown RBP13.97□□□□□ -0.17
COL6A1-207ENST00000612273 GID8Q9NWU2 228 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 MARCH2Q9P0N8 246 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 SUN2Q9UH99 717 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 SLC8A2Q9UPR5 921 aa13.97□□□□□ -0.17
COL6A1-207ENST00000612273 IGLV3-25P01717 112 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 CYBBP04839 570 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 CNPP09543 421 aaKnown RBP13.96□□□□□ -0.17
COL6A1-207ENST00000612273 ATXN1LP0C7T5 689 aaKnown RBP13.96□□□□□ -0.17
COL6A1-207ENST00000612273 NAA20P61599 178 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 TIAL1Q01085 375 aaKnown RBP eCLIP13.96□□□□□ -0.17
COL6A1-207ENST00000612273 SEMG2Q02383 582 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 ANKS6Q68DC2 871 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 SMYD5Q6GMV2 418 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 OGFOD2Q6N063 350 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 KCTD8Q6ZWB6 473 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 FIG4Q92562 907 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 MFSD1Q9H3U5 465 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 CCSER2Q9H7U1 834 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 HCSTQ9UBK5 93 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 WARS2Q9UGM6 360 aaKnown RBP13.96□□□□□ -0.17
COL6A1-207ENST00000612273 BRCA1P38398 1863 aaKnown RBP13.96□□□□□ -0.17
COL6A1-207ENST00000612273 A0A087WXM4 84 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 HAS3O00219 553 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 NOBOXO60393 691 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms