RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 WSCD2Q2TBF2 565 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 USP39Q53GS9 565 aaKnown RBP15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 ZRANB3Q5FWF4 1079 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 LYPLAL1Q5VWZ2 237 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 KIAA0895LQ68EN5 471 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 SDCCAG8Q86SQ7 713 aaPredicted RBP15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 WDR5BQ86VZ2 330 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 TDRPQ86YL5 185 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 CILP2Q8IUL8 1156 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 PIANPQ8IYJ0 282 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 CNPY4Q8N129 248 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 PPM1NQ8N819 430 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 TP53I13Q8NBR0 393 aaPredicted RBP15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 CADM4Q8NFZ8 388 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 CENPTQ96BT3 561 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 ZIM3Q96PE6 472 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 CPNE1Q99829 537 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 MCMBPQ9BTE3 642 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 RIOK2Q9BVS4 552 aaKnown RBP15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 C1QTNF7Q9BXJ2 289 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 ASB8Q9H765 288 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 ZNF446Q9NWS9 450 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 MARCH4Q9P2E8 410 aaPredicted RBP15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 SLC24A2Q9UI40 661 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 CD84Q9UIB8 345 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 FBXO5Q9UKT4 447 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 FBXO4Q9UKT5 387 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 EXOC1LA0A1B0GW35 172 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 FAM47DPA6NHR8 397 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 UGT1A9O60656 530 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 S1PR4O95977 384 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 SOD1P00441 154 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 IVLP07476 585 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 UGT1A6P19224 532 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 UGT1A1P22309 533 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 UGT1A4P22310 534 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 GCAP28676 217 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 UGT1A3P35503 534 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 UGT1A5P35504 534 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 PXNP49023 591 aaPredicted RBP15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 PPP2CBP62714 309 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 PPP2CAP67775 309 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 SEMA3AQ14563 771 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 LRRC14Q15048 493 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 ATP13A5Q4VNC0 1218 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 AARS2Q5JTZ9 985 aaKnown RBP15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 PNCKQ6P2M8 343 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 ADGRD1Q6QNK2 874 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 SLC36A4Q6YBV0 504 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 MICALCLQ6ZW33 695 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 ERMP1Q7Z2K6 904 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 CROCCP2Q86T23 111 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 DENND6AQ8IWF6 608 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 CTAGE3PQ8IX95 158 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 DENND6BQ8NEG7 585 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 RLN3Q8WXF3 142 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 ULK4Q96C45 1275 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 VPS35Q96QK1 796 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 KLF6Q99612 283 aaPredicted RBP15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 SPATA16Q9BXB7 569 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 UGT1A7Q9HAW7 530 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 UGT1A10Q9HAW8 530 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 UGT1A8Q9HAW9 530 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 MBD1Q9UIS9 605 aaPredicted RBP15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 ZNF180Q9UJW8 692 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 TMPRSS11EQ9UL52 423 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 DOCK9Q9BZ29 2069 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 PLXNA2O75051 1894 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 PLXND1Q9Y4D7 1925 aa15.86■□□□□ 0.13
CLTCL1-207ENST00000611723 MED19A0JLT2 244 aaPredicted RBP15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 GOLGA8CPA6NN73 597 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 PIAS1O75925 651 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 AHSGP02765 367 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 PRSS56P0CW18 603 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 GABRB3P28472 473 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 CA5AP35218 305 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 TRIM23P36406 574 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 PPARGP37231 505 aaPredicted RBP15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 GP5P40197 560 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 SLC1A2P43004 574 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 MSH2P43246 934 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 TTPAP49638 278 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 CDKN1CP49918 316 aaPredicted RBP15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 CSE1LP55060 971 aaKnown RBP15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 DMWDQ09019 674 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 IFFO1Q0D2I5 559 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 CTBP1Q13363 440 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 ITIH4Q14624 930 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 EFTUD2Q15029 972 aaKnown RBP eCLIP15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 SETMARQ53H47 684 aaPredicted RBP15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 GRTP1Q5TC63 336 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 ZNF470Q6ECI4 717 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 PSAPL1Q6NUJ1 521 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 ADAMTSL4Q6UY14 1074 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 LONP2Q86WA8 852 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 NXPE1Q8N323 547 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 FRMD1Q8N878 549 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 OR2W6PQ8NHA6 318 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 BTN2A2Q8WVV5 523 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms