RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 KRT12Q99456 494 aa21.68■■□□□ 1.06
CBWD3-207ENST00000611426 SEMA3CQ99985 751 aa21.68■■□□□ 1.06
CBWD3-207ENST00000611426 SUDS3Q9H7L9 328 aaPredicted RBP21.68■■□□□ 1.06
CBWD3-207ENST00000611426 HOMER3Q9NSC5 361 aa21.68■■□□□ 1.06
CBWD3-207ENST00000611426 LRIT1Q9P2V4 623 aa21.68■■□□□ 1.06
CBWD3-207ENST00000611426 PCYOX1Q9UHG3 505 aa21.68■■□□□ 1.06
CBWD3-207ENST00000611426 UNC13CQ8NB66 2214 aa21.68■■□□□ 1.06
CBWD3-207ENST00000611426 PLD2O14939 933 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 KRT1P04264 644 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 PRB1P04280 392 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 ITGA2BP08514 1039 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 KRT10P13645 584 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 PNLIPP16233 465 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 GJC1P36383 396 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 CDKN2BP42772 138 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 SKOR1P84550 965 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 EIF3IQ13347 325 aaKnown RBP21.67■■□□□ 1.06
CBWD3-207ENST00000611426 DHX34Q14147 1143 aaKnown RBP21.67■■□□□ 1.06
CBWD3-207ENST00000611426 DPYSL3Q14195 570 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 ATP13A4Q4VNC1 1196 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 TFDP3Q5H9I0 405 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 RAET1GQ6H3X3 334 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 SPOCD1Q6ZMY3 1216 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 RAB11FIP2Q7L804 512 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 MAATS1Q7Z4T9 603 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 CLEC14AQ86T13 490 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 TSPAN33Q86UF1 283 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 PIH1D2Q8WWB5 315 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 MCCC1Q96RQ3 725 aaPredicted RBP21.67■■□□□ 1.06
CBWD3-207ENST00000611426 POLR1EQ9GZS1 481 aaKnown RBP21.67■■□□□ 1.06
CBWD3-207ENST00000611426 PPIL1Q9Y3C6 166 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 RNF215Q9Y6U7 377 aa21.67■■□□□ 1.06
CBWD3-207ENST00000611426 GCN1Q92616 2671 aaKnown RBP21.67■■□□□ 1.06
CBWD3-207ENST00000611426 MFSD11O43934 449 aa21.66■■□□□ 1.06
CBWD3-207ENST00000611426 CEACAM5P06731 702 aa21.66■■□□□ 1.06
CBWD3-207ENST00000611426 PDHA1P08559 390 aa21.66■■□□□ 1.06
CBWD3-207ENST00000611426 GARSP41250 739 aaKnown RBP21.66■■□□□ 1.06
CBWD3-207ENST00000611426 ARSEP51690 589 aa21.66■■□□□ 1.06
CBWD3-207ENST00000611426 CDK3Q00526 305 aa21.66■■□□□ 1.06
CBWD3-207ENST00000611426 GALNT2Q10471 571 aa21.66■■□□□ 1.06
CBWD3-207ENST00000611426 HLTFQ14527 1009 aaKnown RBP eCLIP21.66■■□□□ 1.06
CBWD3-207ENST00000611426 PAFAH1B3Q15102 231 aaKnown RBP21.66■■□□□ 1.06
CBWD3-207ENST00000611426 MFSD7Q6UXD7 560 aa21.66■■□□□ 1.06
CBWD3-207ENST00000611426 GPBAR1Q8TDU6 330 aa21.66■■□□□ 1.06
CBWD3-207ENST00000611426 SEC14L1Q92503 715 aa21.66■■□□□ 1.06
CBWD3-207ENST00000611426 GSDMCQ9BYG8 508 aa21.66■■□□□ 1.06
CBWD3-207ENST00000611426 DDX47Q9H0S4 455 aaKnown RBP21.66■■□□□ 1.06
CBWD3-207ENST00000611426 DMGDHQ9UI17 866 aaKnown RBP21.66■■□□□ 1.06
CBWD3-207ENST00000611426 ATXN7L1Q9ULK2 861 aaPredicted RBP21.66■■□□□ 1.06
CBWD3-207ENST00000611426 ARHGEF17Q96PE2 2063 aaPredicted RBP21.66■■□□□ 1.06
CBWD3-207ENST00000611426 hCG_1818297A0A087WSY0 165 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 TCRBV7S2A1N4TA0A589 114 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 FAM187AA6NFU0 413 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 RAD51CO43502 376 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 NUDT21O43809 227 aaKnown RBP21.65■■□□□ 1.06
CBWD3-207ENST00000611426 FUCA1P04066 466 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 CCNB1P14635 433 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 CCKBRP32239 447 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 UGT1A5P35504 534 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 GNPDA1P46926 289 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 VSNL1P62760 191 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 C19orf57Q0VDD7 668 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 ILF3Q12906 894 aaKnown RBP eCLIP21.65■■□□□ 1.06
CBWD3-207ENST00000611426 ANKRD20A8PQ5CZ79 823 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 NCBP2-AS2Q69YL0 99 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 TIGD7Q6NT04 549 aaPredicted RBP21.65■■□□□ 1.06
CBWD3-207ENST00000611426 MAP7D3Q8IWC1 876 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.65■■□□□ 1.06
CBWD3-207ENST00000611426 RAPGEF5Q92565 580 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 HERPUD2Q9BSE4 406 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 FRMD8Q9BZ67 464 aaPredicted RBP21.65■■□□□ 1.06
CBWD3-207ENST00000611426 SPATS2LQ9NUQ6 558 aaKnown RBP21.65■■□□□ 1.06
CBWD3-207ENST00000611426 HAUS2Q9NVX0 235 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 TRNAU1APQ9NX07 287 aaKnown RBP21.65■■□□□ 1.06
CBWD3-207ENST00000611426 SUFUQ9UMX1 484 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 ATMQ13315 3056 aa21.65■■□□□ 1.06
CBWD3-207ENST00000611426 A0A0U1RQS6 177 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 LRRD1A4D1F6 860 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 MATN3O15232 486 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 FZD6O60353 706 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 TJP3O95049 919 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 MAP3K6O95382 1288 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 CES1P23141 567 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 KDELR1P24390 212 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 TEAD1P28347 426 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 GPR1P46091 355 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 EPHB1P54762 984 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 DPTQ07507 201 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 VAC14Q08AM6 782 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 PDK2Q15119 407 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 DRICH1Q6PGQ1 229 aaPredicted RBP21.64■■□□□ 1.06
CBWD3-207ENST00000611426 SPRED1Q7Z699 444 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 TECPR1Q7Z6L1 1165 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 NRROSQ86YC3 692 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 KLHL7Q8IXQ5 586 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 ZDHHC1Q8WTX9 485 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.64■■□□□ 1.06
CBWD3-207ENST00000611426 MAML1Q92585 1016 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 ZNF670Q9BS34 389 aa21.64■■□□□ 1.06
CBWD3-207ENST00000611426 FRMD8P1Q9BZ68 369 aaPredicted RBP21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms