RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 JADE3Q92613 823 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 EID2BQ96D98 161 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 C19orf60Q96EN9 201 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 CDRT15Q96T59 188 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 SERPINI1Q99574 410 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 NPAS2Q99743 824 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 S100A14Q9HCY8 104 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 SARS2Q9NP81 518 aaKnown RBP13.54□□□□□ -0.24
NEK3-205ENST00000610828 IL17CQ9P0M4 197 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 PRPF19Q9UMS4 504 aaKnown RBP13.54□□□□□ -0.24
NEK3-205ENST00000610828 NPEPPSL1A6NEC2 478 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 H7C0S8 307 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 MAP3K7O43318 606 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 EFCAB14O75071 495 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 ECI2O75521 394 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 PGLSO95336 258 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 C8AP07357 584 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 CTSAP10619 480 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 EEF1DP29692 281 aaKnown RBP13.54□□□□□ -0.24
NEK3-205ENST00000610828 GKP32189 559 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 HMGCLP35914 325 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 AAGABQ6PD74 315 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 CYHR1Q6ZMK1 362 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 TMC8Q8IU68 726 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 NKAPQ8N5F7 415 aaKnown RBP13.54□□□□□ -0.24
NEK3-205ENST00000610828 TRPC4APQ8TEL6 797 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 USP13Q92995 863 aaPredicted RBP13.54□□□□□ -0.24
NEK3-205ENST00000610828 ACDQ96AP0 544 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 ASB2Q96Q27 587 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 WDR41Q9HAD4 459 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 MAGEE1Q9HCI5 957 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 CCDC167Q9P0B6 97 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 SLC30A1Q9Y6M5 507 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 SYCE1LA8MT33 242 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 ZBBXA8MT70 800 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 NRG2O14511 850 aaPredicted RBP13.53□□□□□ -0.24
NEK3-205ENST00000610828 BMP1P13497 986 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 ACADSP16219 412 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 XIAPP98170 497 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 BCL2L1Q07817 233 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 LMAN2Q12907 356 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 SQLEQ14534 574 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 MPPE1Q53F39 396 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 HTR3DQ70Z44 454 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 EEF1AKMT1Q8WVE0 214 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 PIH1D2Q8WWB5 315 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 FUBP1Q96AE4 644 aaKnown RBP13.53□□□□□ -0.24
NEK3-205ENST00000610828 C3orf30Q96M34 536 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 SMG9Q9H0W8 520 aaKnown RBP13.53□□□□□ -0.24
NEK3-205ENST00000610828 YY1AP1Q9H869 796 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 MRGBPQ9NV56 204 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 DNAJC15Q9Y5T4 150 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 TRAV19A0A0A6YYK7 116 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 IQCF5A8MTL0 148 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 PSMD12O00232 456 aaPredicted RBP13.53□□□□□ -0.24
NEK3-205ENST00000610828 CXCL14O95715 111 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 HSPA1AP0DMV8 641 aaKnown RBP13.53□□□□□ -0.24
NEK3-205ENST00000610828 HSPA1BP0DMV9 641 aaKnown RBP13.53□□□□□ -0.24
NEK3-205ENST00000610828 CD70P32970 193 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 PTGER3P43115 390 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 CLCN4P51793 760 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 FOXA1P55317 472 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 PKNOX1P55347 436 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 SLC7A9P82251 487 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 CACNG1Q06432 222 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 FASTKQ14296 549 aaKnown RBP13.53□□□□□ -0.24
NEK3-205ENST00000610828 UGT3A2Q3SY77 523 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 AGKQ53H12 422 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 LARP4Q71RC2 724 aaKnown RBP eCLIP13.53□□□□□ -0.24
NEK3-205ENST00000610828 PGAM4Q8N0Y7 254 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 ELMOD1Q8N336 334 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 FIBCD1Q8N539 461 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 RNF148Q8N7C7 305 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 SNX31Q8N9S9 440 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 CD200R1Q8TD46 325 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 KCNJ9Q92806 393 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 LINGO1Q96FE5 620 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 KCNA7Q96RP8 456 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 CORO1BQ9BR76 489 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 MRPL1Q9BYD6 325 aaKnown RBP13.53□□□□□ -0.24
NEK3-205ENST00000610828 TNKS2Q9H2K2 1166 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 C11orf49Q9H6J7 331 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 FBRSL1Q9HCM7 1045 aaKnown RBP13.53□□□□□ -0.24
NEK3-205ENST00000610828 SEMA4BQ9NPR2 832 aaPredicted RBP13.53□□□□□ -0.24
NEK3-205ENST00000610828 STK39Q9UEW8 545 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 ZNF510Q9Y2H8 683 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 PTGDR2Q9Y5Y4 395 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 KIAA1671Q9BY89 1806 aa13.53□□□□□ -0.24
NEK3-205ENST00000610828 C1orf232A0A0U1RR37 186 aa13.52□□□□□ -0.24
NEK3-205ENST00000610828 AZIN1O14977 448 aa13.52□□□□□ -0.24
NEK3-205ENST00000610828 ESR1P03372 595 aa13.52□□□□□ -0.24
NEK3-205ENST00000610828 THOP1P52888 689 aa13.52□□□□□ -0.24
NEK3-205ENST00000610828 IL2P60568 153 aa13.52□□□□□ -0.24
NEK3-205ENST00000610828 CLCQ05315 142 aa13.52□□□□□ -0.24
NEK3-205ENST00000610828 MMEL1Q495T6 779 aa13.52□□□□□ -0.24
NEK3-205ENST00000610828 FAM151BQ6UXP7 276 aa13.52□□□□□ -0.24
NEK3-205ENST00000610828 CPNE9Q8IYJ1 553 aa13.52□□□□□ -0.24
NEK3-205ENST00000610828 PLCD3Q8N3E9 789 aa13.52□□□□□ -0.24
NEK3-205ENST00000610828 CPXM2Q8N436 756 aa13.52□□□□□ -0.24
NEK3-205ENST00000610828 TMEM199Q8N511 208 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms