RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ELK3P41970 407 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CASP3P42574 277 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CDKN2BP42772 138 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 OR3A3P47888 321 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CLK3P49761 638 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 VAMP7P51809 220 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF135P52742 658 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 MLLT10P55197 1068 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 EIF6P56537 245 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 TAS2R40P59535 323 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 GABARAPL2P60520 117 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 SRP54P61011 504 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 NKX3-2P78367 333 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 MRPS22P82650 360 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 MRPS9P82933 396 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 GALK2Q01415 458 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 GHRHRQ02643 423 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 GCNT1Q02742 428 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 GNA12Q03113 381 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 BAMBIQ13145 260 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 STX5Q13190 355 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 DPYSL3Q14195 570 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 MRPL58Q14197 206 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 FRG1Q14331 258 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 COG2Q14746 738 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 POU6F1Q14863 301 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 MAPRE2Q15555 327 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ATP6AP1Q15904 470 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 DGUOKQ16854 277 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ASPRV1Q53RT3 343 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ESCO2Q56NI9 601 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 YIF1BQ5BJH7 314 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 TFDP3Q5H9I0 405 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 FAM47AQ5JRC9 791 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 C1orf220Q5T0J3 134 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 AGAP6Q5VW22 663 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 BROXQ5VW32 411 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 C9orf131Q5VYM1 1079 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLFN13Q68D06 897 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 HMBOX1Q6NT76 420 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 RINT1Q6NUQ1 792 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 C8orf82Q6P1X6 216 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 POMZP3Q6PJE2 187 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 BBS12Q6ZW61 710 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CYP4V2Q6ZWL3 525 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 MAVSQ7Z434 540 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 KCTD20Q7Z5Y7 419 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 MILR1Q7Z6M3 343 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 GLRX5Q86SX6 157 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CAND1Q86VP6 1230 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CDR2LQ86X02 465 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CIR1Q86X95 450 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 RHPN2Q8IUC4 686 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 MAPKAPK5Q8IW41 473 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ARHGEF19Q8IW93 802 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CCDC28AQ8IWP9 274 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ELMOD2Q8IZ81 293 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLC38A6Q8IZM9 456 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF444Q8N0Y2 327 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZCCHC7Q8N3Z6 543 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 DHRSXQ8N5I4 330 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 PPM1NQ8N819 430 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 GLIS1Q8NBF1 620 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 TXNDC5Q8NBS9 432 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 IL17RDQ8NFM7 739 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CMASQ8NFW8 434 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 OR6F1Q8NGZ6 308 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 LHFPL5Q8TAF8 219 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 URGCPQ8TCY9 931 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF384Q8TF68 577 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CAPSLQ8WWF8 208 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 NSUN4Q96CB9 384 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 RTP4Q96DX8 246 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CENPNQ96H22 339 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CEP295NLQ96MC4 621 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 RIPOR3Q96MK2 946 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF560Q96MR9 790 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 KLHL32Q96NJ5 620 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 RDH12Q96NR8 316 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 RPRD1AQ96P16 312 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 AGAP4Q96P64 663 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 PSKH2Q96QS6 385 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 KLF6Q99612 283 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 MCMBPQ9BTE3 642 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ADI1Q9BV57 179 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 APOL6Q9BWW8 343 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 HEMGNQ9BXL5 484 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 DNAI2Q9GZS0 605 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 SNX25Q9H3E2 840 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 C12orf65Q9H3J6 166 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 MUC13Q9H3R2 512 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 WDR41Q9HAD4 459 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 FANCEQ9HB96 536 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 AS3MTQ9HBK9 375 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 RAVER2Q9HCJ3 691 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF304Q9HCX3 659 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 GINM1Q9NU53 330 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 SEPT11Q9NVA2 429 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 RAB20Q9NX57 234 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMEM260Q9NX78 707 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms