RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 SLC17A4Q9Y2C5 497 aa9.42□□□□□ -0.9
SQSTM1P1-201ENST00000603451 SNX11Q9Y5W9 270 aa9.42□□□□□ -0.9
SQSTM1P1-201ENST00000603451 ARL5AQ9Y689 179 aa9.42□□□□□ -0.9
SQSTM1P1-201ENST00000603451 CSNK1G3Q9Y6M4 447 aa9.42□□□□□ -0.9
SQSTM1P1-201ENST00000603451 TRBV5-4A0A0C4DH59 114 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 FAM237BA0A1B0GVD1 139 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 PRSS38A1L453 326 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 NEMP2A6NFY4 417 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 SDR42E2A6NKP2 422 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 F8W8V4 182 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 QSOX1O00391 747 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 GAPDHSO14556 408 aaPredicted RBP9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 AURKAO14965 403 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 EIF3HO15372 352 aaKnown RBP eCLIP9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 RAD51CO43502 376 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 SRP72O76094 671 aaKnown RBP9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 TTC4O95801 387 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 SLC4A1P02730 911 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 GSTM1P09488 218 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 PPARGP37231 505 aaPredicted RBP9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 GRK6P43250 576 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 HK3P52790 923 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 XIAPP98170 497 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 GSTM4Q03013 218 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 PPARDQ03181 441 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 CACNG1Q06432 222 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 C2orf54Q08AI8 447 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 OLIG2Q13516 323 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 SEPT6Q14141 434 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 PTPRRQ15256 657 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 SF3A2Q15428 464 aaKnown RBP9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 HIF1AQ16665 826 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 LYPLAL1Q5VWZ2 237 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 DUPD1Q68J44 220 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 KIAA0930Q6ICG6 404 aaPredicted RBP9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 TCEAL6Q6IPX3 200 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 LVRNQ6Q4G3 990 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 CEP128Q6ZU80 1094 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 CAND1Q86VP6 1230 aaKnown RBP9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 TAB3Q8N5C8 712 aaPredicted RBP9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 GABPB2Q8TAK5 448 aaPredicted RBP9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 TCEAL3Q969E4 200 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 SMIM14Q96QK8 99 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 TTC1Q99614 292 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 SLC13A1Q9BZW2 595 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 TSPYL1Q9H0U9 437 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 TREX1Q9NSU2 369 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 TRNAU1APQ9NX07 287 aaKnown RBP9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 NCKIPSDQ9NZQ3 722 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 SOX13Q9UN79 622 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 OR1A2Q9Y585 309 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 SLC30A1Q9Y6M5 507 aa9.41□□□□□ -0.9
SQSTM1P1-201ENST00000603451 FRYLO94915 3013 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 IGLV3-16A0A075B6K0 115 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 TCRBV7S3A2A0A539 114 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 FADS2P1A8MWK0 482 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 CFAP99D6REC4 459 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 K7ESM1 405 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 CDX4O14627 284 aaPredicted RBP9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 TPP1O14773 563 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 PFDN6O15212 129 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 KCNJ13O60928 360 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 PIAS2O75928 621 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 USP1O94782 785 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 SLC25A14O95258 325 aaPredicted RBP9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 RALBP11234 206 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 HOXD11P31277 338 aaPredicted RBP9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 GRIA1P42261 906 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 ARL4CP56559 192 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 SRP54P61011 504 aaKnown RBP9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 PRAMEP78395 509 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 ILF2Q12905 390 aaKnown RBP9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 FRG1Q14331 258 aaKnown RBP9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 ITIH4Q14624 930 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 ELOCQ15369 112 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 ATP13A5Q4VNC0 1218 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 FAM182AQ5T1J6 154 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 CERCAMQ5T4B2 595 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 ANKRD22Q5VYY1 191 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 LAYNQ6UX15 382 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 FAM151BQ6UXP7 276 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 DBX2Q6ZNG2 339 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 TMEM135Q86UB9 458 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 PHACTR4Q8IZ21 702 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 NXPE1Q8N323 547 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 DCLK2Q8N568 766 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 OR13J1Q8NGT2 312 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 CDKN2AIPNLQ96HQ2 116 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 DNAJC1Q96KC8 554 aaKnown RBP9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 TRIM51Q9BSJ1 452 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 DUSP23Q9BVJ7 150 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 GTPBP2Q9BX10 602 aaKnown RBP9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 TRIM39Q9HCM9 518 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 FAM114A2Q9NRY5 505 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 TM7SF3Q9NS93 570 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 EVA1BQ9NVM1 165 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 DNAJC28Q9NX36 388 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 SPASTQ9UBP0 616 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 APOBEC3BQ9UH17 382 aaKnown RBP9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 CD84Q9UIB8 345 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms