RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 INTS9Q9NV88 658 aaKnown RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 WWOXQ9NZC7 414 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 PCDHA6Q9UN73 950 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 CCL27Q9Y4X3 112 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 AOX1Q06278 1338 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 A0A087WZ62 844 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 TEX51A0A1B0GUA7 166 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 A0A1W2PPW3 197 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 K7ERQ8 282 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 PER2O15055 1255 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 HTRA2O43464 458 aaPredicted RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 GMNNO75496 209 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 ACTL6BO94805 426 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 KLHL18O94889 574 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 MATN4O95460 622 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 FUCA1P04066 466 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 RALAP11233 206 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 EIF2AK2P19525 551 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 GRK3P35626 688 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 RGS7P49802 495 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 ADCY7P51828 1080 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 TGM3Q08188 693 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 MGAT5Q09328 741 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 SF3A3Q12874 501 aaKnown RBP eCLIP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 PRAMEF20Q5VT98 475 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF787Q6DD87 383 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 RWDD4Q6NW29 188 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 TTI2Q6NXR4 508 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 CES3Q6UWW8 571 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 LRRC74BQ6ZQY2 392 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 ACAD11Q709F0 780 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 ALLCQ8N6M5 410 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 FANK1Q8TC84 345 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 CIDECQ96AQ7 238 aaPredicted RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 INPP4AQ96PE3 977 aaPredicted RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 REEP2Q9BRK0 252 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 FDXACB1Q9BRP7 624 aaPredicted RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 ORAI3Q9BRQ5 295 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 SF3B5Q9BWJ5 86 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 IFIH1Q9BYX4 1025 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 LRMDAQ9H2I8 198 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 PRDM8Q9NQV8 689 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 DDX28Q9NUL7 540 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 TXLNGQ9NUQ3 528 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 ASNSD1Q9NWL6 643 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 GULP1Q9UBP9 304 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 VPS51Q9UID3 782 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 ITGA11Q9UKX5 1188 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 CHKBQ9Y259 395 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 STON1Q9Y6Q2 735 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 UMODL1Q5DID0 1318 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 A0A0U1RQJ8 604 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 TMEM120BA0PK00 339 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 C5orf51A6NDU8 294 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 OR5K3A6NET4 321 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF879B4DU55 563 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 TEX46H3BTG2 121 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 PRPF4O43172 522 aaKnown RBP eCLIP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 JRKO75564 520 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 TRMUO75648 421 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 CIB2O75838 187 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 F9P00740 461 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 OAS1P00973 400 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 PRKCBP05771 671 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 CAPN1P07384 714 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 SPARCP09486 303 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 ZCCHC18P0CG32 403 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 BMP4P12644 408 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 TCN1P20061 433 aaPredicted RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 CXCR2P25025 360 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 KLRK1P26718 216 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 GSTM2P28161 218 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 STX2P32856 288 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 PGM1P36871 562 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 PAFAH1B1P43034 410 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 GPD2P43304 727 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 RPL26P61254 145 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 RHAGQ02094 409 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 RPL6Q02878 288 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 SCRN3Q0VDG4 424 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 INPP5AQ14642 412 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 MTF1Q14872 753 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 RGS21Q2M5E4 152 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 SPATS1Q496A3 300 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 LRRC24Q50LG9 513 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 PAPD7Q5XG87 772 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 C18orf63Q68DL7 685 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 CASC4Q6P4E1 433 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 MACC1Q6ZN28 852 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 PLEKHH3Q7Z736 793 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 WDR5BQ86VZ2 330 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 DCP2Q8IU60 420 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 DDX54Q8TDD1 881 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF384Q8TF68 577 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 SELENOMQ8WWX9 145 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 PRPF31Q8WWY3 499 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 TRIB2Q92519 343 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 BORCS5Q969J3 196 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 GAD1Q99259 594 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 WACQ9BTA9 647 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms