RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 CMC1Q7Z7K0 106 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 SLC41A1Q8IVJ1 513 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 RAVER1Q8IY67 606 aaKnown RBP17.36■□□□□ 0.37
DDX49-213ENST00000602113 NRSN1Q8IZ57 195 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 GPATCH11Q8N954 259 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 CXorf40AQ8TE69 158 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 SPATA16Q9BXB7 569 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 CD93Q9NPY3 652 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 SNX15Q9NRS6 342 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 SCML1Q9UN30 329 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 SPAG7O75391 227 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 CSRP3P50461 194 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 GYS2P54840 703 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 PPP2R2AP63151 447 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 SLC18A2Q05940 514 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 CCDC15Q0P6D6 951 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 MPP2Q14168 576 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 TTC31Q49AM3 519 aaPredicted RBP17.36■□□□□ 0.37
DDX49-213ENST00000602113 CERS6Q6ZMG9 384 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 CYP2U1Q7Z449 544 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 NXPE1Q8N323 547 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 DTX3LQ8TDB6 740 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 HMGB4Q8WW32 186 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.36■□□□□ 0.371e-7■■■■■ 66.7
DDX49-213ENST00000602113 ELMO2Q96JJ3 720 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 NECAB3Q96P71 396 aaPredicted RBP17.36■□□□□ 0.37
DDX49-213ENST00000602113 SMC6Q96SB8 1091 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 CDH19Q9H159 772 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 CRLS1Q9UJA2 301 aa17.36■□□□□ 0.37
DDX49-213ENST00000602113 UBA6A0AVT1 1052 aaPredicted RBP17.35■□□□□ 0.37
DDX49-213ENST00000602113 IGLON5A6NGN9 336 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 FADS2P1A8MWK0 482 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 PLRG1O43660 514 aaKnown RBP17.35■□□□□ 0.37
DDX49-213ENST00000602113 LZTS3O60299 673 aaPredicted RBP17.35■□□□□ 0.37
DDX49-213ENST00000602113 PCDH8O95206 1070 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 SAT1P21673 171 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 ACRV1P26436 265 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 GMPRP36959 345 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 CCNFP41002 786 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 SERPINB8P50452 374 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 DGKEP52429 567 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 USP10Q14694 798 aaKnown RBP17.35■□□□□ 0.37
DDX49-213ENST00000602113 PPM1JQ5JR12 505 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 RNF187Q5TA31 235 aaPredicted RBP17.35■□□□□ 0.37
DDX49-213ENST00000602113 USP30Q70CQ3 517 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 SPNS2Q8IVW8 549 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 CEP97Q8IW35 865 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 CNPY4Q8N129 248 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 PELI3Q8N2H9 469 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 TRAM1L1Q8N609 369 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 BANPQ8N9N5 519 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 OR14C36Q8NHC7 312 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 FAM76AQ8TAV0 307 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 AP2M1Q96CW1 435 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 BIRC8Q96P09 236 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 OLFM1Q99784 485 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 POLMQ9NP87 494 aaPredicted RBP17.35■□□□□ 0.37
DDX49-213ENST00000602113 FZD4Q9ULV1 537 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 PLXNA2O75051 1894 aa17.35■□□□□ 0.37
DDX49-213ENST00000602113 TYROBPO43914 113 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 TYK2P29597 1187 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 FMO4P31512 558 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 PTGER3P43115 390 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 POLD2P49005 469 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 ADPRHP54922 357 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 CDKN2DP55273 166 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 TAS2R39P59534 338 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 TIAL1Q01085 375 aaKnown RBP eCLIP17.34■□□□□ 0.37
DDX49-213ENST00000602113 ITGA9Q13797 1035 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 PDE1CQ14123 709 aaPredicted RBP17.34■□□□□ 0.37
DDX49-213ENST00000602113 HECTD2Q5U5R9 776 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 SEL1L3Q68CR1 1132 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 KDM7AQ6ZMT4 941 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 ZNF765Q7L2R6 523 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 FAM124AQ86V42 546 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 PJA1Q8NG27 643 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 CLDN23Q96B33 292 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 NUS1Q96E22 293 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 SELENOSQ9BQE4 189 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 AARSD1Q9BTE6 412 aaKnown RBP17.34■□□□□ 0.37
DDX49-213ENST00000602113 BOCQ9BWV1 1114 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 P2RY12Q9H244 342 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 SSU72Q9NP77 194 aaKnown RBP17.34■□□□□ 0.37
DDX49-213ENST00000602113 KCNK9Q9NPC2 374 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 PCMTD2Q9NV79 361 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 EBF1Q9UH73 591 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 ZFR2Q9UPR6 939 aaKnown RBP17.34■□□□□ 0.37
DDX49-213ENST00000602113 VPS9D1Q9Y2B5 631 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 LRRK1Q38SD2 2015 aa17.34■□□□□ 0.37
DDX49-213ENST00000602113 TMEM120BA0PK00 339 aa17.33■□□□□ 0.37
DDX49-213ENST00000602113 PHGDHO43175 533 aaKnown RBP17.33■□□□□ 0.37
DDX49-213ENST00000602113 ATG13O75143 517 aa17.33■□□□□ 0.37
DDX49-213ENST00000602113 ACADMP11310 421 aa17.33■□□□□ 0.37
DDX49-213ENST00000602113 ATP1A2P50993 1020 aa17.33■□□□□ 0.37
DDX49-213ENST00000602113 TPMTP51580 245 aa17.33■□□□□ 0.37
DDX49-213ENST00000602113 ZXDAP98168 799 aa17.33■□□□□ 0.37
DDX49-213ENST00000602113 POU4F1Q01851 419 aa17.33■□□□□ 0.37
DDX49-213ENST00000602113 ZKSCAN8Q15776 578 aaPredicted RBP17.33■□□□□ 0.37
DDX49-213ENST00000602113 ZNF284Q2VY69 593 aa17.33■□□□□ 0.37
DDX49-213ENST00000602113 CTSL3PQ5NE16 218 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms