RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 GUCY1A3Q02108 690 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 OLIG2Q13516 323 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 LAMB3Q13751 1172 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 DUOXA1Q1HG43 343 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 ZNF284Q2VY69 593 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 SIRPB2Q5JXA9 342 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 SEL1L3Q68CR1 1132 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 LRRC66Q68CR7 880 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 LIPIQ6XZB0 460 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 MARK2Q7KZI7 788 aaKnown RBP10.05□□□□□ -0.8
UPF1-213ENST00000601981 GLT6D1Q7Z4J2 308 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 SRRM1Q8IYB3 904 aaKnown RBP10.05□□□□□ -0.8
UPF1-213ENST00000601981 SLC25A41Q8N5S1 370 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 SUMF1Q8NBK3 374 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 BLOC1S5Q8TDH9 187 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 MZB1Q8WU39 189 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 PTCD2Q8WV60 388 aaKnown RBP10.05□□□□□ -0.8
UPF1-213ENST00000601981 CDKL2Q92772 493 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 NUS1Q96E22 293 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 C1QTNF2Q9BXJ5 285 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 NUSAP1Q9BXS6 441 aaKnown RBP10.05□□□□□ -0.8
UPF1-213ENST00000601981 CDH19Q9H159 772 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 ZFYVE1Q9HBF4 777 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 MRM3Q9HC36 420 aaKnown RBP10.05□□□□□ -0.8
UPF1-213ENST00000601981 PILRBQ9UKJ0 227 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 SOX13Q9UN79 622 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 ZFR2Q9UPR6 939 aaKnown RBP10.05□□□□□ -0.8
UPF1-213ENST00000601981 ZNF711Q9Y462 761 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 ZFHX2Q9C0A1 2572 aaPredicted RBP10.05□□□□□ -0.8
UPF1-213ENST00000601981 MYLKQ15746 1914 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 ADAMTS9Q9P2N4 1935 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 TMEM120BA0PK00 339 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 RGSL1A5PLK6 1076 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 C2orf81A6NN90 581 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 A8MX80 341 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 WNT9AO14904 365 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 PRPF4O43172 522 aaKnown RBP eCLIP10.04□□□□□ -0.8
UPF1-213ENST00000601981 SPINT1O43278 529 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 GFRA3O60609 400 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 FAM155BO75949 473 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 CRTAMO95727 393 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 PAK4O96013 591 aaPredicted RBP10.04□□□□□ -0.8
UPF1-213ENST00000601981 SLC4A1P02730 911 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 CFIP05156 583 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 ATXN1LP0C7T5 689 aaKnown RBP10.04□□□□□ -0.8
UPF1-213ENST00000601981 CHN1P15882 459 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 CNTFP26441 200 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 MAOBP27338 520 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 CD38P28907 300 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 LSP1P33241 339 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 C21orf59P57076 290 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 CRADDP78560 199 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 MGAT5Q09328 741 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 OVGP1Q12889 678 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 RALGDSQ12967 914 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 IHHQ14623 411 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 LRRC14Q15048 493 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 AGERQ15109 404 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 CNGA3Q16281 694 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 LGSNQ5TDP6 509 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 PEAR1Q5VY43 1037 aaPredicted RBP10.04□□□□□ -0.8
UPF1-213ENST00000601981 ZDHHC20Q5W0Z9 365 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 DENND5AQ6IQ26 1287 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 TRMT10BQ6PF06 316 aaKnown RBP10.04□□□□□ -0.8
UPF1-213ENST00000601981 CRTC1Q6UUV9 634 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 RANBP10Q6VN20 620 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 TMEM135Q86UB9 458 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 IQCHQ86VS3 1027 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 DCP2Q8IU60 420 aaKnown RBP10.04□□□□□ -0.8
UPF1-213ENST00000601981 CTAGE3PQ8IX95 158 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 NRSN1Q8IZ57 195 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 PPM1NQ8N819 430 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.04□□□□□ -0.8
UPF1-213ENST00000601981 KLK6Q92876 244 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 ALKBH8Q96BT7 664 aaKnown RBP10.04□□□□□ -0.8
UPF1-213ENST00000601981 MTBPQ96DY7 904 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 MRRFQ96E11 262 aaKnown RBP10.04□□□□□ -0.8
UPF1-213ENST00000601981 LENG8Q96PV6 779 aaPredicted RBP10.04□□□□□ -0.8
UPF1-213ENST00000601981 SMC6Q96SB8 1091 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 KIFC1Q9BW19 673 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 ARRDC1-AS1Q9H2J1 176 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 ARNT2Q9HBZ2 717 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 TM9SF3Q9HD45 589 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 SMYD2Q9NRG4 433 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 INTS9Q9NV88 658 aaKnown RBP10.04□□□□□ -0.8
UPF1-213ENST00000601981 PIH1D1Q9NWS0 290 aaKnown RBP10.04□□□□□ -0.8
UPF1-213ENST00000601981 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.04□□□□□ -0.8
UPF1-213ENST00000601981 PKP3Q9Y446 797 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 HS3ST3A1Q9Y663 406 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 RPS6KL1Q9Y6S9 549 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 FAM169AQ9Y6X4 670 aa10.04□□□□□ -0.8
UPF1-213ENST00000601981 ZNF106Q9H2Y7 1883 aaKnown RBP10.04□□□□□ -0.8
UPF1-213ENST00000601981 ATXN2Q99700 1313 aaKnown RBP10.04□□□□□ -0.8
UPF1-213ENST00000601981 DMDP11532 3685 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 CXorf49A8MYA2 514 aaPredicted RBP10.03□□□□□ -0.8
UPF1-213ENST00000601981 KHNYNO15037 678 aaKnown RBP10.03□□□□□ -0.8
UPF1-213ENST00000601981 KRT37O76014 449 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 KRT38O76015 456 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 RECQL5O94762 991 aaPredicted RBP10.03□□□□□ -0.8
UPF1-213ENST00000601981 CLDN7O95471 211 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms