RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 HSF5Q4G112 596 aaPredicted RBP17.89■□□□□ 0.45
VRK3-225ENST00000601912 IER5LQ5T953 404 aa17.89■□□□□ 0.45
VRK3-225ENST00000601912 CEP97Q8IW35 865 aa17.89■□□□□ 0.45
VRK3-225ENST00000601912 NRSN1Q8IZ57 195 aa17.89■□□□□ 0.45
VRK3-225ENST00000601912 DTX3LQ8TDB6 740 aa17.89■□□□□ 0.45
VRK3-225ENST00000601912 ULK4Q96C45 1275 aa17.89■□□□□ 0.45
VRK3-225ENST00000601912 AARSD1Q9BTE6 412 aaKnown RBP17.89■□□□□ 0.45
VRK3-225ENST00000601912 DUSP12Q9UNI6 340 aa17.89■□□□□ 0.45
VRK3-225ENST00000601912 SCN8AQ9UQD0 1980 aa17.89■□□□□ 0.45
VRK3-225ENST00000601912 CKAP5Q14008 2032 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 MID1O15344 667 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 ESR1P03372 595 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 UGT1A6P19224 532 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 UGT1A1P22309 533 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 UGT1A4P22310 534 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 ACRV1P26436 265 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 UGT1A3P35503 534 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 UGT1A5P35504 534 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 ETV3P41162 512 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 LIG3P49916 1009 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 CNTN1Q12860 1018 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 DBN1Q16643 649 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 ZNF284Q2VY69 593 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 N4BP2L1Q5TBK1 243 aaPredicted RBP17.88■□□□□ 0.45
VRK3-225ENST00000601912 ZNF549Q6P9A3 640 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 RFLNAQ6ZTI6 216 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 Q6ZVL8 140 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 TBC1D1Q86TI0 1168 aaPredicted RBP17.88■□□□□ 0.45
VRK3-225ENST00000601912 RBFAQ8N0V3 343 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 CKAP2Q8WWK9 683 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 OLFM1Q99784 485 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 WRAP53Q9BUR4 548 aaKnown RBP17.88■□□□□ 0.45
VRK3-225ENST00000601912 SPATA16Q9BXB7 569 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 C12orf65Q9H3J6 166 aaKnown RBP17.88■□□□□ 0.45
VRK3-225ENST00000601912 CCDC134Q9H6E4 229 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 GPAMQ9HCL2 828 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.88■□□□□ 0.45
VRK3-225ENST00000601912 NFKBIL1Q9UBC1 381 aaPredicted RBP17.88■□□□□ 0.45
VRK3-225ENST00000601912 CD84Q9UIB8 345 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 ITM2BQ9Y287 266 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 PCDHB1Q9Y5F3 818 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 BPTFQ12830 3046 aa17.88■□□□□ 0.45
VRK3-225ENST00000601912 ZNF106Q9H2Y7 1883 aaKnown RBP17.87■□□□□ 0.45
VRK3-225ENST00000601912 AGAP14A8MT82 685 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 PLK4O00444 970 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 PRMT5O14744 637 aaPredicted RBP17.87■□□□□ 0.45
VRK3-225ENST00000601912 WNT9AO14904 365 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 GPR39O43194 453 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 ADAM23O75077 832 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 PKMP14618 531 aaKnown RBP17.87■□□□□ 0.45
VRK3-225ENST00000601912 FDXRP22570 491 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 ETV4P43268 484 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 CDKN2DP55273 166 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 TERF2Q15554 542 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 MLF2Q15773 248 aaPredicted RBP17.87■□□□□ 0.45
VRK3-225ENST00000601912 CCDC153Q494R4 210 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 TMEM52BQ4KMG9 183 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 EOGTQ5NDL2 527 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 KIAA1211LQ6NV74 962 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 TECPR1Q7Z6L1 1165 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 CLEC14AQ86T13 490 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 NXPE1Q8N323 547 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 CCDC63Q8NA47 563 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 MAGEB18Q96M61 343 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 CLPBQ9H078 707 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 POPDC3Q9HBV1 291 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 TAS2R13Q9NYV9 303 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 ATG2BQ96BY7 2078 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 SRRM3A6NNA2 597 aaPredicted RBP17.87■□□□□ 0.45
VRK3-225ENST00000601912 SPINT1O43278 529 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 OR1I1O60431 355 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 RHOBTB1O94844 696 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 PYGLP06737 847 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 DHRS4L1P0CG22 281 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 KPNA2P52292 529 aaKnown RBP17.87■□□□□ 0.45
VRK3-225ENST00000601912 COPAP53621 1224 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 RPS14P62263 151 aaKnown RBP17.87■□□□□ 0.45
VRK3-225ENST00000601912 IRF9Q00978 393 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 CCINQ13939 588 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 ZNF460Q14592 562 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 ITIH4Q14624 930 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 TSNAXIP1Q2TAA8 658 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 ATP13A5Q4VNC0 1218 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 PIP5KL1Q5T9C9 394 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 ZNF852Q6ZMS4 543 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 CACUL1Q86Y37 369 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 ADHFE1Q8IWW8 467 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 HDDC3Q8N4P3 179 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 TRAM1L1Q8N609 369 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 ARMC2Q8NEN0 867 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 CXorf40AQ8TE69 158 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 BIRC8Q96P09 236 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 ZSCAN5AQ9BUG6 496 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 FADS3Q9Y5Q0 445 aa17.87■□□□□ 0.45
VRK3-225ENST00000601912 PRUNE2Q8WUY3 3088 aa17.86■□□□□ 0.45
VRK3-225ENST00000601912 AP1G1O43747 822 aa17.86■□□□□ 0.45
VRK3-225ENST00000601912 LZTS3O60299 673 aaPredicted RBP17.86■□□□□ 0.45
VRK3-225ENST00000601912 VPS26AO75436 327 aa17.86■□□□□ 0.45
VRK3-225ENST00000601912 TOP3BO95985 862 aaKnown RBP17.86■□□□□ 0.45
VRK3-225ENST00000601912 DNTTP04053 509 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms