RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 MATN4O95460 622 aa20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 EPOP01588 193 aa20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 IGLV3-27P01718 113 aa20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 HSD17B1P14061 328 aa20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 SOX11P35716 441 aa20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 CDKN1CP49918 316 aaPredicted RBP20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 AGTR2P50052 363 aa20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 ZNF157P51786 506 aaPredicted RBP20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 YBEYP58557 167 aaPredicted RBP20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 CTXN3Q4LDR2 81 aa20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 PRMT9Q6P2P2 845 aa20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 BLOC1S3Q6QNY0 202 aa20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 FIBCD1Q8N539 461 aa20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 TFAP2CQ92754 450 aa20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 TRIB3Q96RU7 358 aa20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 CRISPLD1Q9H336 500 aa20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 SLC52A3Q9NQ40 469 aa20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 AQP12BA6NM10 295 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 FAM155AB1AL88 458 aaPredicted RBP20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 DLGAP1O14490 977 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 INPPL1O15357 1258 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 RPLP2P05387 115 aaKnown RBP20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 RGRP47804 291 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 KCNQ1P51787 676 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 IRAK1BP1Q5VVH5 260 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 IFNEQ86WN2 208 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 RASAL3Q86YV0 1011 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 AQP12AQ8IXF9 295 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 OR7D4Q8NG98 312 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 OR4K2Q8NGD2 314 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 DNAJB14Q8TBM8 379 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 DTNBP1Q96EV8 351 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 DERL2Q9GZP9 239 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 TLR8Q9NR97 1041 aaKnown RBP20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 TAS2R13Q9NYV9 303 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 GPR45Q9Y5Y3 372 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 GBF1Q92538 1859 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 ZFC3H1O60293 1989 aaKnown RBP20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 FAM92AA1XBS5 289 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 NPEPPSL1A6NEC2 478 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 ARPC2O15144 300 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 NDST3O95803 873 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 MTHFD1P11586 935 aaKnown RBP20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 IDO1P14902 403 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 RABL3Q5HYI8 236 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 SCIMPQ6UWF3 145 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 LGI2Q8N0V4 545 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 GPR21Q99679 349 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 SLC30A3Q99726 388 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 ARHGAP39Q9C0H5 1083 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 AGPAT4Q9NRZ5 378 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 SMOXQ9NWM0 555 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 GID8Q9NWU2 228 aa20.11■□□□□ 0.81
SHKBP1-225ENST00000600733 ENPP3O14638 875 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 HNRNPRO43390 633 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 BAIAP3O94812 1187 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 TACR2P21452 398 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 PSMA4P25789 261 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 HOXD9P28356 352 aaPredicted RBP20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 MAPKAPK2P49137 400 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 ZNF140P52738 457 aaPredicted RBP20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 INPP5AQ14642 412 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 TMEM259Q4ZIN3 620 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 LCN8Q6JVE9 175 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 UGT3A1Q6NUS8 523 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 FUBP1Q96AE4 644 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 ESAMQ96AP7 390 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 RMDN1Q96DB5 314 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 SEPT5Q99719 369 aaPredicted RBP20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 TRIM15Q9C019 465 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 SYTL2Q9HCH5 934 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 OLA1Q9NTK5 396 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 INTS10Q9NVR2 710 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 NLE1Q9NVX2 485 aaPredicted RBP20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 ACTR3BQ9P1U1 418 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 ATXN10Q9UBB4 475 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 ZNF225Q9UK10 706 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 GABRQQ9UN88 632 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 PCDHA9Q9Y5H5 950 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 LCHNA4D1U4 455 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 ASPDHA6ND91 283 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 CES1P23141 567 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 MAGEA11P43364 429 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 ALDH3B2P48448 385 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 RAD51Q06609 339 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 BNIP2Q12982 314 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 TRIM71Q2Q1W2 868 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 PABPC1LQ4VXU2 614 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 ANKS6Q68DC2 871 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 CMTR2Q8IYT2 770 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 ADGRG5Q8IZF4 528 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 ZBED2Q9BTP6 218 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 CCDC68Q9H2F9 335 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 HSFX1Q9UBD0 423 aa20.1■□□□□ 0.81
SHKBP1-225ENST00000600733 KLHL33A6NCF5 533 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 BTN3A1O00481 513 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 SEPT4O43236 478 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 TRMUO75648 421 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 TMCC1O94876 653 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms