RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 GKN2Q86XP6 184 aa16.08■□□□□ 0.16
LSM4-206ENST00000600289 REXO1L1PQ8IX06 675 aa16.08■□□□□ 0.16
LSM4-206ENST00000600289 TTC30BQ8N4P2 665 aa16.08■□□□□ 0.16
LSM4-206ENST00000600289 HIC2Q96JB3 615 aa16.08■□□□□ 0.16
LSM4-206ENST00000600289 PLEKHG4BQ96PX9 1271 aa16.08■□□□□ 0.16
LSM4-206ENST00000600289 AGAP2Q99490 1192 aa16.08■□□□□ 0.16
LSM4-206ENST00000600289 C19orf43Q9BQ61 176 aa16.08■□□□□ 0.16
LSM4-206ENST00000600289 ZSCAN5AQ9BUG6 496 aa16.08■□□□□ 0.16
LSM4-206ENST00000600289 GPR63Q9BZJ6 419 aa16.08■□□□□ 0.16
LSM4-206ENST00000600289 TRNAU1APQ9NX07 287 aaKnown RBP16.08■□□□□ 0.16
LSM4-206ENST00000600289 VPS18Q9P253 973 aa16.08■□□□□ 0.16
LSM4-206ENST00000600289 DKK4Q9UBT3 224 aa16.08■□□□□ 0.16
LSM4-206ENST00000600289 FEZ2Q9UHY8 353 aaPredicted RBP16.08■□□□□ 0.16
LSM4-206ENST00000600289 SHOC2Q9UQ13 582 aa16.08■□□□□ 0.16
LSM4-206ENST00000600289 GOLGA6CA6NDK9 693 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 GOLGA6BA6NDN3 693 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 FADS2P1A8MWK0 482 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 ATXN7O15265 892 aaPredicted RBP16.07■□□□□ 0.16
LSM4-206ENST00000600289 YY2O15391 372 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 CELA2BP08218 269 aaPredicted RBP16.07■□□□□ 0.16
LSM4-206ENST00000600289 PIRTP0C851 137 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 GOLGA6DP0CG33 693 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 CHRNA4P43681 627 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 GDF10P55107 478 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 DAB2P98082 770 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 C1orf61Q13536 156 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 DEFB133Q30KQ1 61 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 KCTD11Q693B1 232 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 DRICH1Q6PGQ1 229 aaPredicted RBP16.07■□□□□ 0.16
LSM4-206ENST00000600289 ARHGEF18Q6ZSZ5 1173 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 ZNF605Q86T29 641 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 GALNT15Q8N3T1 639 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 TRAM1L1Q8N609 369 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 PNPLA1Q8N8W4 532 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 FAM71DQ8N9W8 422 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 GPR26Q8NDV2 337 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 MAIP1Q8WWC4 291 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 SCG3Q8WXD2 468 aaKnown RBP16.07■□□□□ 0.16
LSM4-206ENST00000600289 GLMNQ92990 594 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 LRRC45Q96CN5 670 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 TMEM121Q9BTD3 319 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 ARNT2Q9HBZ2 717 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 CYP4F12Q9HCS2 524 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 MRPL40Q9NQ50 206 aaKnown RBP16.07■□□□□ 0.16
LSM4-206ENST00000600289 GOLGA6AQ9NYA3 693 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 CNOT6Q9ULM6 557 aaKnown RBP16.07■□□□□ 0.16
LSM4-206ENST00000600289 JRKLQ9Y4A0 524 aa16.07■□□□□ 0.16
LSM4-206ENST00000600289 A0A087WV48 116 aa16.06■□□□□ 0.16
LSM4-206ENST00000600289 EME2A4GXA9 379 aaPredicted RBP16.06■□□□□ 0.16
LSM4-206ENST00000600289 F5H423 210 aaPredicted RBP16.06■□□□□ 0.16
LSM4-206ENST00000600289 AURKAO14965 403 aa16.06■□□□□ 0.16
LSM4-206ENST00000600289 PPFIA2O75334 1257 aa16.06■□□□□ 0.16
LSM4-206ENST00000600289 FUCA1P04066 466 aa16.06■□□□□ 0.16
LSM4-206ENST00000600289 BPIP17213 487 aa16.06■□□□□ 0.16
LSM4-206ENST00000600289 RPIAP49247 311 aa16.06■□□□□ 0.16
LSM4-206ENST00000600289 CCNG2Q16589 344 aa16.06■□□□□ 0.16
LSM4-206ENST00000600289 RD3Q7Z3Z2 195 aa16.06■□□□□ 0.16
LSM4-206ENST00000600289 CACTIN-AS1Q8N1I8 211 aa16.06■□□□□ 0.16
LSM4-206ENST00000600289 ZNF843Q8N446 348 aa16.06■□□□□ 0.16
LSM4-206ENST00000600289 GPBAR1Q8TDU6 330 aa16.06■□□□□ 0.16
LSM4-206ENST00000600289 ATG4AQ8WYN0 398 aa16.06■□□□□ 0.16
LSM4-206ENST00000600289 VPS35Q96QK1 796 aa16.06■□□□□ 0.16
LSM4-206ENST00000600289 FICDQ9BVA6 458 aa16.06■□□□□ 0.16
LSM4-206ENST00000600289 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.06■□□□□ 0.16
LSM4-206ENST00000600289 IL17CQ9P0M4 197 aa16.06■□□□□ 0.16
LSM4-206ENST00000600289 SUFUQ9UMX1 484 aa16.06■□□□□ 0.16
LSM4-206ENST00000600289 ARHGEF17Q96PE2 2063 aaPredicted RBP16.06■□□□□ 0.16
LSM4-206ENST00000600289 GPR89AB7ZAQ6 455 aa16.05■□□□□ 0.16
LSM4-206ENST00000600289 METTL18O95568 372 aa16.05■□□□□ 0.16
LSM4-206ENST00000600289 AGTP01019 485 aa16.05■□□□□ 0.16
LSM4-206ENST00000600289 GPR89BP0CG08 455 aa16.05■□□□□ 0.16
LSM4-206ENST00000600289 E2F1Q01094 437 aa16.05■□□□□ 0.16
LSM4-206ENST00000600289 MSLNQ13421 630 aaPredicted RBP16.05■□□□□ 0.16
LSM4-206ENST00000600289 NR0B2Q15466 257 aa16.05■□□□□ 0.16
LSM4-206ENST00000600289 ZNF569Q5MCW4 686 aa16.05■□□□□ 0.16
LSM4-206ENST00000600289 GLT6D1Q7Z4J2 308 aa16.05■□□□□ 0.16
LSM4-206ENST00000600289 TMPRSS12Q86WS5 348 aa16.05■□□□□ 0.16
LSM4-206ENST00000600289 SLC35F3Q8IY50 421 aa16.05■□□□□ 0.16
LSM4-206ENST00000600289 SLC25A41Q8N5S1 370 aa16.05■□□□□ 0.16
LSM4-206ENST00000600289 ARL10Q8N8L6 244 aa16.05■□□□□ 0.16
LSM4-206ENST00000600289 TBL1YQ9BQ87 522 aa16.05■□□□□ 0.16
LSM4-206ENST00000600289 TMEM168Q9H0V1 697 aa16.05■□□□□ 0.16
LSM4-206ENST00000600289 RMI1Q9H9A7 625 aa16.05■□□□□ 0.16
LSM4-206ENST00000600289 CARS2Q9HA77 564 aaKnown RBP16.05■□□□□ 0.16
LSM4-206ENST00000600289 DOLKQ9UPQ8 538 aa16.05■□□□□ 0.16
LSM4-206ENST00000600289 GOLGA4Q13439 2230 aaKnown RBP16.04■□□□□ 0.16
LSM4-206ENST00000600289 ERI2A8K979 691 aaKnown RBP16.04■□□□□ 0.16
LSM4-206ENST00000600289 PSMD3O43242 534 aa16.04■□□□□ 0.16
LSM4-206ENST00000600289 PEX6Q13608 980 aa16.04■□□□□ 0.16
LSM4-206ENST00000600289 LRP8Q14114 963 aa16.04■□□□□ 0.16
LSM4-206ENST00000600289 PYCR3Q53H96 274 aa16.04■□□□□ 0.16
LSM4-206ENST00000600289 DENND5AQ6IQ26 1287 aa16.04■□□□□ 0.16
LSM4-206ENST00000600289 OGFOD3Q6PK18 319 aa16.04■□□□□ 0.16
LSM4-206ENST00000600289 DHRS13Q6UX07 377 aa16.04■□□□□ 0.16
LSM4-206ENST00000600289 RASGEF1CQ8N431 466 aa16.04■□□□□ 0.16
LSM4-206ENST00000600289 BLOC1S5Q8TDH9 187 aa16.04■□□□□ 0.16
LSM4-206ENST00000600289 PTCD2Q8WV60 388 aaKnown RBP16.04■□□□□ 0.16
LSM4-206ENST00000600289 NAT6Q93015 286 aa16.04■□□□□ 0.16
LSM4-206ENST00000600289 SPATA16Q9BXB7 569 aa16.04■□□□□ 0.16
LSM4-206ENST00000600289 GSDMCQ9BYG8 508 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms