RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 GOLGA6DP0CG33 693 aa16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 TEAD1P28347 426 aa16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 MC2RQ01718 297 aa16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 TRAF2Q12933 501 aa16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 DEFB109BQ30KR1 87 aa16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 SNAP47Q5SQN1 464 aa16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 ERMARDQ5T6L9 678 aa16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 RAET1GQ6H3X3 334 aa16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 ARHGAP22Q7Z5H3 698 aa16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 TRIM74Q86UV6 250 aa16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 NLGN4XQ8N0W4 816 aa16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 NLGN4YQ8NFZ3 816 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 FNIP1Q8TF40 1166 aa16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 DPYSL5Q9BPU6 564 aa16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 SNRNP25Q9BV90 132 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 GPN2Q9H9Y4 310 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 GOLGA6AQ9NYA3 693 aa16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 NENFQ9UMX5 172 aa16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 PCDHA13Q9Y5I0 950 aa16.36■□□□□ 0.21
SHKBP1-215ENST00000597649 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 K7EM74 188 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 DAPK3O43293 454 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 LCA5LO95447 670 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 CPP00450 1065 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 TMEM253P0C7T8 217 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 MAP4P27816 1152 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 FASLGP48023 281 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 RENBPP51606 427 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 RAB15P59190 212 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 GPLD1P80108 840 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 DPTQ07507 201 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 CDC20Q12834 499 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 MAMLD1Q13495 774 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 PYCR3Q53H96 274 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 PLEKHA7Q6IQ23 1121 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 TXLNBQ8N3L3 684 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 SFRP1Q8N474 314 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 SLC37A2Q8TED4 501 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 SCRN2Q96FV2 425 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 OR2M4Q96R27 311 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 PACSIN1Q9BY11 444 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 TRIM7Q9C029 511 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 ABCG8Q9H221 673 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 KCTD5Q9NXV2 234 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 CWC15Q9P013 229 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 CTTNBP2NLQ9P2B4 639 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 CD84Q9UIB8 345 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 INTUQ9ULD6 942 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 PHTF1Q9UMS5 762 aa16.35■□□□□ 0.21
SHKBP1-215ENST00000597649 SOCS5O75159 536 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 MAP3K6O95382 1288 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 CYP1A2P05177 515 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 CTPS1P17812 591 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 F8A1P23610 371 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 PSMA2P25787 234 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 DPYSQ14117 519 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 TMCO4Q5TGY1 634 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 MARK2Q7KZI7 788 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 KIAA1328Q86T90 577 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 FAM26EQ8N5C1 309 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 APOBEC4Q8WW27 367 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 SCAMP4Q969E2 229 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 MIB2Q96AX9 1013 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 TEFMQ96QE5 360 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 MCCC1Q96RQ3 725 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 NUDCD1Q96RS6 583 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 AGAP2Q99490 1192 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 SLC38A3Q99624 504 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 NUP85Q9BW27 656 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 FBXO8Q9NRD0 319 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 ETNK2Q9NVF9 386 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 PPIL1Q9Y3C6 166 aa16.34■□□□□ 0.21
SHKBP1-215ENST00000597649 A0A1W2PQ67 120 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 BLACEA4D250 179 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 PRR19A6NJB7 356 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 PSMD11O00231 422 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 MTSS1O43312 755 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 STK17BO94768 372 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 NR1D1P20393 614 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 MIPP30301 263 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 GPR1P46091 355 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 MAXP61244 160 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 ABHD18Q0P651 414 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 PPP6R3Q5H9R7 873 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 HIST2H2BCQ6DN03 193 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 WDR74Q6RFH5 385 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 ADAMTSL4Q6UY14 1074 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 ACRBPQ8NEB7 543 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 PIH1D2Q8WWB5 315 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 RNF31Q96EP0 1072 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 AHCYL2Q96HN2 611 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 ZNF599Q96NL3 588 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 UVRAGQ9P2Y5 699 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 PRKAB1Q9Y478 270 aa16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 TMEM184BQ9Y519 407 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 MRPS18BQ9Y676 258 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-215ENST00000597649 TMEM191CA6NGB0 347 aa16.32■□□□□ 0.2
SHKBP1-215ENST00000597649 MAFKO60675 156 aa16.32■□□□□ 0.2
SHKBP1-215ENST00000597649 PGLSO95336 258 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms