RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 ZNF398Q8TD17 642 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 ZNF669Q96BR6 464 aaPredicted RBP15.4■□□□□ 0.06
SMCO4-206ENST00000596676 CFAP36Q96G28 342 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 PLEKHG4BQ96PX9 1271 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 EBNA1BP2Q99848 306 aaKnown RBP15.4■□□□□ 0.06
SMCO4-206ENST00000596676 TEX101Q9BY14 249 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 ANKZF1Q9H8Y5 726 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 CAPN10Q9HC96 672 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 SAYSD1Q9NPB0 183 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 FAM114A2Q9NRY5 505 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 RXFP3Q9NSD7 469 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 NCDNQ9UBB6 729 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 NFKBIL1Q9UBC1 381 aaPredicted RBP15.4■□□□□ 0.06
SMCO4-206ENST00000596676 ANKRD6Q9Y2G4 727 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 PCYT1BQ9Y5K3 369 aaPredicted RBP15.4■□□□□ 0.06
SMCO4-206ENST00000596676 TEX264Q9Y6I9 313 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 LAMA1P25391 3075 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 TP53BP1Q12888 1972 aaPredicted RBP15.4■□□□□ 0.06
SMCO4-206ENST00000596676 TMEM131Q92545 1883 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 ZFHX2Q9C0A1 2572 aaPredicted RBP15.39■□□□□ 0.05
SMCO4-206ENST00000596676 OTOGLQ3ZCN5 2332 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 ZCWPW2A0A1B0GU75 182 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 PROB1E7EW31 1015 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 PRAMEF1O95521 474 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 TSHRP16473 764 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 NXPH1P58417 271 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 CDK3Q00526 305 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 PDE1BQ01064 536 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 ACVR1Q04771 509 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 FZD2Q14332 565 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 HLTFQ14527 1009 aaKnown RBP eCLIP15.39■□□□□ 0.05
SMCO4-206ENST00000596676 SEMA3AQ14563 771 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 TCEA2Q15560 299 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 DNAJC21Q5F1R6 531 aaKnown RBP15.39■□□□□ 0.05
SMCO4-206ENST00000596676 ZRANB3Q5FWF4 1079 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 PSAPL1Q6NUJ1 521 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 ENPP7Q6UWV6 458 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 ADAMTSL4Q6UY14 1074 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 LDB1Q86U70 411 aaPredicted RBP15.39■□□□□ 0.05
SMCO4-206ENST00000596676 PDIK1LQ8N165 341 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 FBXO36Q8NEA4 188 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 OR6P1Q8NGX9 317 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 TSACCQ96A04 125 aaPredicted RBP15.39■□□□□ 0.05
SMCO4-206ENST00000596676 TCEAL2Q9H3H9 227 aaPredicted RBP15.39■□□□□ 0.05
SMCO4-206ENST00000596676 ASB8Q9H765 288 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 WDR26Q9H7D7 661 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 IL21RQ9HBE5 538 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 MRM3Q9HC36 420 aaKnown RBP15.39■□□□□ 0.05
SMCO4-206ENST00000596676 MRPL40Q9NQ50 206 aaKnown RBP15.39■□□□□ 0.05
SMCO4-206ENST00000596676 GPR27Q9NS67 375 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 RAD18Q9NS91 495 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 SAMD15Q9P1V8 674 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 MARCH4Q9P2E8 410 aaPredicted RBP15.39■□□□□ 0.05
SMCO4-206ENST00000596676 KLF15Q9UIH9 416 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 GMEB2Q9UKD1 530 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 RIMKLBQ9ULI2 386 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 NFU1Q9UMS0 254 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 PCDHGA5Q9Y5G8 931 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 RPS6KL1Q9Y6S9 549 aa15.39■□□□□ 0.05
SMCO4-206ENST00000596676 TDRD6O60522 2096 aaKnown RBP15.39■□□□□ 0.05
SMCO4-206ENST00000596676 PCDH15Q96QU1 1955 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 FAM237BA0A1B0GVD1 139 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 E7ESA3 106 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 SMAPO00193 183 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 VAPBO95292 243 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 MYBL2P10244 700 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 TGM1P22735 817 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 FOXN2P32314 431 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 HADHAP40939 763 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 CTSKP43235 329 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 RABIFP47224 123 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 ARCN1P48444 511 aaKnown RBP15.38■□□□□ 0.05
SMCO4-206ENST00000596676 C21orf59P57076 290 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 GRIK2Q13002 908 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 EIF2B5Q13144 721 aaKnown RBP15.38■□□□□ 0.05
SMCO4-206ENST00000596676 NFATC2Q13469 925 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 NFATC4Q14934 902 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 SLC23A3Q6PIS1 610 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 UNC5AQ6ZN44 842 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 CAPN12Q6ZSI9 719 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 MARK2Q7KZI7 788 aaKnown RBP15.38■□□□□ 0.05
SMCO4-206ENST00000596676 TAS2R42Q7RTR8 314 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 TMEM135Q86UB9 458 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 RAVER1Q8IY67 606 aaKnown RBP15.38■□□□□ 0.05
SMCO4-206ENST00000596676 BTN2A2Q8WVV5 523 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 OR1E3Q8WZA6 343 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 GLYATL1Q969I3 302 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 COX14Q96I36 57 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 HIC2Q96JB3 615 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 ZSCAN5AQ9BUG6 496 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 FGF22Q9HCT0 170 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 KCTD5Q9NXV2 234 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 SLC17A6Q9P2U8 582 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 SUSD2Q9UGT4 822 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 SLC6A14Q9UN76 642 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 PRKAB1Q9Y478 270 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 CACNA1EQ15878 2313 aa15.38■□□□□ 0.05
SMCO4-206ENST00000596676 SPTY2D1-AS1A0A0U1RR47 76 aa15.37■□□□□ 0.05
SMCO4-206ENST00000596676 PRR5-ARHGAP8B1AHC4 643 aa15.37■□□□□ 0.05
SMCO4-206ENST00000596676 H7C0S8 307 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms