RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 PSMD11O00231 422 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 PLK4O00444 970 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 OR1I1O60431 355 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 ADAM23O75077 832 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 ELFN1P0C7U0 828 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 COL6A2P12110 1019 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 P2RY2P41231 377 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 TIAL1Q01085 375 aaKnown RBP eCLIP20.67■□□□□ 0.9
PNKP-203ENST00000593946 CST6Q15828 149 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 DBN1Q16643 649 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 N4BP2L1Q5TBK1 243 aaPredicted RBP20.67■□□□□ 0.9
PNKP-203ENST00000593946 SDE2Q6IQ49 451 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 TRMT11Q7Z4G4 463 aaKnown RBP20.67■□□□□ 0.9
PNKP-203ENST00000593946 RAD18Q9NS91 495 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 ACOT9Q9Y305 439 aa20.67■□□□□ 0.9
PNKP-203ENST00000593946 RNASEH1O60930 286 aaKnown RBP20.66■□□□□ 0.9
PNKP-203ENST00000593946 WISP3O95389 354 aaPredicted RBP20.66■□□□□ 0.9
PNKP-203ENST00000593946 KLF8O95600 359 aaPredicted RBP20.66■□□□□ 0.9
PNKP-203ENST00000593946 ADH1BP00325 375 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 UGT1A6P19224 532 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 UGT1A1P22309 533 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 UGT1A4P22310 534 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 ACRV1P26436 265 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 DRD3P35462 400 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 UGT1A3P35503 534 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 UGT1A5P35504 534 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 PPARGP37231 505 aaPredicted RBP20.66■□□□□ 0.9
PNKP-203ENST00000593946 COPAP53621 1224 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 MRPS21P82921 87 aaKnown RBP20.66■□□□□ 0.9
PNKP-203ENST00000593946 TFF2Q03403 129 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 CNTN1Q12860 1018 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 LYPLAL1Q5VWZ2 237 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 KIAA1211LQ6NV74 962 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 Q6ZVL8 140 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 CCDC91Q7Z6B0 441 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 TECPR1Q7Z6L1 1165 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 RAVER1Q8IY67 606 aaKnown RBP20.66■□□□□ 0.9
PNKP-203ENST00000593946 CENPLQ8N0S6 344 aaPredicted RBP20.66■□□□□ 0.9
PNKP-203ENST00000593946 NXPE1Q8N323 547 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 DTX3LQ8TDB6 740 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 RAB7BQ96AH8 199 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 MAGEB18Q96M61 343 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 CDH19Q9H159 772 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 ZNF358Q9NW07 568 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 CRLS1Q9UJA2 301 aa20.66■□□□□ 0.9
PNKP-203ENST00000593946 TRPM6Q9BX84 2022 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 A0A087X1B8 175 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 GOLGA8CPA6NN73 597 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 MID1O15344 667 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 PLIN3O60664 434 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 GM2AP17900 193 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 FMO4P31512 558 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 ETV3P41162 512 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 LIG3P49916 1009 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 ITGA9Q13797 1035 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 STARD3Q14849 445 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 PDK4Q16654 411 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 ATP13A5Q4VNC0 1218 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 SLC44A4Q53GD3 710 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 HABP4Q5JVS0 413 aaKnown RBP20.65■□□□□ 0.9
PNKP-203ENST00000593946 PIP5KL1Q5T9C9 394 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 C16orf46Q6P387 395 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 AADATQ8N5Z0 425 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 TXNDC5Q8NBS9 432 aaKnown RBP20.65■□□□□ 0.9
PNKP-203ENST00000593946 ARMC2Q8NEN0 867 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 OR2T3Q8NH03 318 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 ZNF317Q96PQ6 595 aaPredicted RBP20.65■□□□□ 0.9
PNKP-203ENST00000593946 TTC1Q99614 292 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 EPN3Q9H201 632 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 P2RY12Q9H244 342 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 CCDC68Q9H2F9 335 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 FBRSQ9HAH7 460 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 TMEM216Q9P0N5 145 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 CD84Q9UIB8 345 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 MED16Q9Y2X0 877 aa20.65■□□□□ 0.9
PNKP-203ENST00000593946 PROCP04070 461 aa20.64■□□□□ 0.9
PNKP-203ENST00000593946 PKMP14618 531 aaKnown RBP20.64■□□□□ 0.9
PNKP-203ENST00000593946 C5AR1P21730 350 aa20.64■□□□□ 0.9
PNKP-203ENST00000593946 SERPINB4P48594 390 aa20.64■□□□□ 0.9
PNKP-203ENST00000593946 CCINQ13939 588 aa20.64■□□□□ 0.9
PNKP-203ENST00000593946 TMEM52BQ4KMG9 183 aa20.64■□□□□ 0.9
PNKP-203ENST00000593946 CTSL3PQ5NE16 218 aa20.64■□□□□ 0.9
PNKP-203ENST00000593946 HENMT1Q5T8I9 393 aaKnown RBP20.64■□□□□ 0.9
PNKP-203ENST00000593946 ZNF776Q68DI1 518 aaPredicted RBP20.64■□□□□ 0.9
PNKP-203ENST00000593946 PIM3Q86V86 326 aa20.64■□□□□ 0.9
PNKP-203ENST00000593946 FAM3CQ92520 227 aa20.64■□□□□ 0.9
PNKP-203ENST00000593946 COQ10AQ96MF6 247 aa20.64■□□□□ 0.9
PNKP-203ENST00000593946 WRAP53Q9BUR4 548 aaKnown RBP20.64■□□□□ 0.9
PNKP-203ENST00000593946 FAM83DQ9H4H8 585 aa20.64■□□□□ 0.9
PNKP-203ENST00000593946 POPDC3Q9HBV1 291 aa20.64■□□□□ 0.9
PNKP-203ENST00000593946 CD248Q9HCU0 757 aa20.64■□□□□ 0.9
PNKP-203ENST00000593946 COMMD10Q9Y6G5 202 aa20.64■□□□□ 0.9
PNKP-203ENST00000593946 A0A1W2PQF6 199 aa20.64■□□□□ 0.89
PNKP-203ENST00000593946 PRMT5O14744 637 aaPredicted RBP20.64■□□□□ 0.89
PNKP-203ENST00000593946 ESR1P03372 595 aa20.64■□□□□ 0.89
PNKP-203ENST00000593946 HOXB2P14652 356 aa20.64■□□□□ 0.89
PNKP-203ENST00000593946 CD9P21926 228 aa20.64■□□□□ 0.89
PNKP-203ENST00000593946 RPS3P23396 243 aaKnown RBP eCLIP20.64■□□□□ 0.89
PNKP-203ENST00000593946 SEC24CP53992 1094 aa20.64■□□□□ 0.89
PNKP-203ENST00000593946 RPS14P62263 151 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms