RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 MAP3K6O95382 1288 aa14.64□□□□□ -0.07
PNKP-202ENST00000593706 ASMTLO95671 621 aa14.64□□□□□ -0.07
PNKP-202ENST00000593706 SOD1P00441 154 aa14.64□□□□□ -0.07
PNKP-202ENST00000593706 PYGLP06737 847 aa14.64□□□□□ -0.07
PNKP-202ENST00000593706 ZNF30P17039 623 aa14.64□□□□□ -0.07
PNKP-202ENST00000593706 LRP8Q14114 963 aa14.64□□□□□ -0.07
PNKP-202ENST00000593706 ANKS6Q68DC2 871 aa14.64□□□□□ -0.07
PNKP-202ENST00000593706 TMEM71Q6P5X7 295 aa14.64□□□□□ -0.07
PNKP-202ENST00000593706 PTRH1Q86Y79 214 aaKnown RBP14.64□□□□□ -0.07
PNKP-202ENST00000593706 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.64□□□□□ -0.07
PNKP-202ENST00000593706 ZNF564Q8TBZ8 553 aaPredicted RBP14.64□□□□□ -0.07
PNKP-202ENST00000593706 SLC37A2Q8TED4 501 aa14.64□□□□□ -0.07
PNKP-202ENST00000593706 SCAMP4Q969E2 229 aa14.64□□□□□ -0.07
PNKP-202ENST00000593706 KIAA1143Q96AT1 154 aaPredicted RBP14.64□□□□□ -0.07
PNKP-202ENST00000593706 TEFMQ96QE5 360 aaKnown RBP14.64□□□□□ -0.07
PNKP-202ENST00000593706 CHP1Q99653 195 aa14.64□□□□□ -0.07
PNKP-202ENST00000593706 POLR1EQ9GZS1 481 aaKnown RBP14.64□□□□□ -0.07
PNKP-202ENST00000593706 UVRAGQ9P2Y5 699 aa14.64□□□□□ -0.07
PNKP-202ENST00000593706 SPTAN1Q13813 2472 aaKnown RBP14.64□□□□□ -0.07
PNKP-202ENST00000593706 RP1L1Q8IWN7 2480 aaPredicted RBP14.63□□□□□ -0.07
PNKP-202ENST00000593706 TRBV23OR9-2A0A075B6M9 112 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 A8MU76 341 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 B4E171 279 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 MYO1FO00160 1098 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 INPP4BO15327 924 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 PROSCO94903 275 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 PDHA1P08559 390 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 MAN1A1P33908 653 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 TSPAN7P41732 249 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 NOP2P46087 812 aaKnown RBP14.63□□□□□ -0.07
PNKP-202ENST00000593706 CCR10P46092 362 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 FASLGP48023 281 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 HHEXQ03014 270 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 SQSTM1Q13501 440 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 KRT81Q14533 505 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 PYCR3Q53H96 274 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 RFLNAQ6ZTI6 216 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 ZNF765Q7L2R6 523 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 TECPR1Q7Z6L1 1165 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 CBARPQ8N350 705 aaPredicted RBP14.63□□□□□ -0.07
PNKP-202ENST00000593706 EXD1Q8NHP7 514 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 PIH1D2Q8WWB5 315 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 SCARF2Q96GP6 870 aaPredicted RBP14.63□□□□□ -0.07
PNKP-202ENST00000593706 CATSPER2Q96P56 530 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 GPN2Q9H9Y4 310 aaPredicted RBP14.63□□□□□ -0.07
PNKP-202ENST00000593706 RCOR3Q9P2K3 495 aaPredicted RBP14.63□□□□□ -0.07
PNKP-202ENST00000593706 ZNHIT2Q9UHR6 403 aa14.63□□□□□ -0.07
PNKP-202ENST00000593706 SPTBN1Q01082 2364 aaKnown RBP14.62□□□□□ -0.07
PNKP-202ENST00000593706 A0A0J9YYE9 177 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 CAPN5O15484 640 aaPredicted RBP14.62□□□□□ -0.07
PNKP-202ENST00000593706 TRBC1P01850 177 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 CD48P09326 243 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 TMEM253P0C7T8 217 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 PRKAR1AP10644 381 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 CA4P22748 312 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 MAPK9P45984 424 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 TAS2R40P59535 323 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 NFATC2Q13469 925 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 CEACAM20Q6UY09 585 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 CHST15Q7LFX5 561 aaPredicted RBP14.62□□□□□ -0.07
PNKP-202ENST00000593706 SFRP1Q8N474 314 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 SMIM14Q96QK8 99 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 CTRCQ99895 268 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 RIOK2Q9BVS4 552 aaKnown RBP14.62□□□□□ -0.07
PNKP-202ENST00000593706 NHEJ1Q9H9Q4 299 aaPredicted RBP14.62□□□□□ -0.07
PNKP-202ENST00000593706 SPTLC3Q9NUV7 552 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 HAUS2Q9NVX0 235 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 TUBD1Q9UJT1 453 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 DNPEPQ9ULA0 475 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 PPIL1Q9Y3C6 166 aa14.62□□□□□ -0.07
PNKP-202ENST00000593706 MFSD11O43934 449 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 MTA2O94776 668 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 ATP1A1P05023 1023 aaKnown RBP14.61□□□□□ -0.07
PNKP-202ENST00000593706 H2AFZP0C0S5 128 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 SSR1P43307 286 aaKnown RBP14.61□□□□□ -0.07
PNKP-202ENST00000593706 STC1P52823 247 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 PTSQ03393 145 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 DPYSL3Q14195 570 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 WDR74Q6RFH5 385 aaPredicted RBP14.61□□□□□ -0.07
PNKP-202ENST00000593706 H2AFVQ71UI9 128 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 KDELC2Q7Z4H8 507 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 NLGN4XQ8N0W4 816 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 NLGN4YQ8NFZ3 816 aaPredicted RBP14.61□□□□□ -0.07
PNKP-202ENST00000593706 CTNNBL1Q8WYA6 563 aaPredicted RBP14.61□□□□□ -0.07
PNKP-202ENST00000593706 NCSTNQ92542 709 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 FAF2Q96CS3 445 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 RTP4Q96DX8 246 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 AGAP2Q99490 1192 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 EPN3Q9H201 632 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 VPS18Q9P253 973 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 CTTNBP2NLQ9P2B4 639 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 KLHL3Q9UH77 587 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 PILRAQ9UKJ1 303 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 PRKAB1Q9Y478 270 aa14.61□□□□□ -0.07
PNKP-202ENST00000593706 USP9YO00507 2555 aaPredicted RBP14.61□□□□□ -0.07
PNKP-202ENST00000593706 USP9XQ93008 2570 aaPredicted RBP14.6□□□□□ -0.07
PNKP-202ENST00000593706 FZD6O60353 706 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 SNX2O60749 519 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 EML2O95834 649 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 SLC2A4P14672 509 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms