RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 OR51F1A6NGY5 319 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 CCL22O00626 93 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 LDB2O43679 373 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 EEDO75530 441 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 SNAP29O95721 258 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 ZNF37AP17032 561 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 TMBIM6P55061 237 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 DIO3P55073 304 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 CBX2Q14781 532 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 RABL3Q5HYI8 236 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 CCDC80Q76M96 950 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 UMODL1-AS1Q8N2C9 162 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 GPR150Q8NGU9 434 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 RSPH1Q8WYR4 309 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 CASP10Q92851 521 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 TADA1Q96BN2 335 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 SLC30A3Q99726 388 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 CENPOQ9BU64 300 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 TRIM8Q9BZR9 551 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 IFT80Q9P2H3 777 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 HS3ST4Q9Y661 456 aa14.79□□□□□ -0.04
SMARCA4-219ENST00000592604 IQCA1LA6NCM1 817 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 MSI1O43347 362 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 SLC2A3P11169 496 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 PORP16435 677 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 HTR1EP28566 365 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 GJA5P36382 358 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 AFF1P51825 1210 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 MLLT6P55198 1093 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 TIGD5Q53EQ6 642 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 SLC44A4Q53GD3 710 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 XKR5Q6UX68 686 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 DEFB132Q7Z7B7 95 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 RYBPQ8N488 228 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 DDHD1Q8NEL9 900 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 OSCP1Q8WVF1 389 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 ACDQ96AP0 544 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 GAD1Q99259 594 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 MRPL42Q9Y6G3 142 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 SLC4A1P02730 911 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 UGT1A1P22309 533 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 UGT1A4P22310 534 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 UGT1A3P35503 534 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 UGT1A5P35504 534 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 KCNK10P57789 538 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 MAXP61244 160 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 CLCQ05315 142 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 SLC10A7Q0GE19 358 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 NFATC3Q12968 1075 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 LCP2Q13094 533 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 TGFBIQ15582 683 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 PAGE3Q5JUK9 113 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 SIRPB2Q5JXA9 342 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 ZNF773Q6PK81 442 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 DCDC5Q6ZRR9 648 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 IFNEQ86WN2 208 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 PEX13Q92968 403 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 C1orf74Q96LT6 269 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 TBATAQ96M53 351 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 PKMYT1Q99640 499 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 TMLHEQ9NVH6 421 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 AIG1Q9NVV5 245 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 ZNF711Q9Y462 761 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 KCTD3Q9Y597 815 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 SLC30A1Q9Y6M5 507 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 PTPRDP23468 1912 aa14.78□□□□□ -0.04
SMARCA4-219ENST00000592604 DOCK4Q8N1I0 1966 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 PATJQ8NI35 1801 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 LOC285095A0A1B0GVY8 99 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 SOBPA7XYQ1 873 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 H0Y858 1186 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 H3BMM5 538 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 HAS3O00219 553 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 CYBBP04839 570 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 TFPTP0C1Z6 253 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 ATXN1LP0C7T5 689 aaKnown RBP14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 NCK1P16333 377 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 POLR2IP36954 125 aaKnown RBP14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 PHEXP78562 749 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 DSC2Q02487 901 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 BNIP3Q12983 259 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 CBX3Q13185 183 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 MARC1Q5VT66 337 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 NANOGP8Q6NSW7 305 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 PROSER1Q86XN7 944 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 KIAA2013Q8IYS2 634 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 PDPRQ8NCN5 879 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 BPIFB1Q8TDL5 484 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 BIRC7Q96CA5 298 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 BDH2Q9BUT1 245 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 TLR9Q9NR96 1032 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 GMIPQ9P107 970 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 BTRCQ9Y297 605 aa14.77□□□□□ -0.04
SMARCA4-219ENST00000592604 A0A1B0GTL3 188 aa14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 SEC14L2O76054 403 aa14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 GLP2RO95838 553 aa14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 MBL2P11226 248 aaPredicted RBP14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 RPL9P32969 192 aaKnown RBP14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 BMXP51813 675 aa14.77□□□□□ -0.05
SMARCA4-219ENST00000592604 ITKQ08881 620 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms