RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 MRPL14Q6P1L8 145 aaKnown RBP10.35□□□□□ -0.75
VPS4B-207ENST00000591519 RFLNAQ6ZTI6 216 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 USP53Q70EK8 1073 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 NRSN1Q8IZ57 195 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 EXD3Q8N9H8 876 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 SPC24Q8NBT2 197 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 EXD1Q8NHP7 514 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 COX14Q96I36 57 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 LYSMD1Q96S90 227 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 SEMA3CQ99985 751 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 NUP85Q9BW27 656 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 PACSIN1Q9BY11 444 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 POLR1EQ9GZS1 481 aaKnown RBP10.35□□□□□ -0.75
VPS4B-207ENST00000591519 RDH14Q9HBH5 336 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 NT5MQ9NPB1 228 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 SPTLC3Q9NUV7 552 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 AKAP7Q9P0M2 348 aaPredicted RBP10.35□□□□□ -0.75
VPS4B-207ENST00000591519 PDP2Q9P2J9 529 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 ANAPC7Q9UJX3 599 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 RPL26L1Q9UNX3 145 aaKnown RBP10.35□□□□□ -0.75
VPS4B-207ENST00000591519 PCDHGA3Q9Y5H0 932 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 PIEZO2Q9H5I5 2752 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 IGHV1OR21-1A0A087WYE8 117 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 IGHV5-10-1A0A0J9YXX1 117 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 ZIC2O95409 532 aaPredicted RBP10.34□□□□□ -0.75
VPS4B-207ENST00000591519 CD48P09326 243 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 FGF3P11487 239 aaPredicted RBP10.34□□□□□ -0.75
VPS4B-207ENST00000591519 CCL4P13236 92 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 CTPS1P17812 591 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 HNRNPH3P31942 346 aaKnown RBP10.34□□□□□ -0.75
VPS4B-207ENST00000591519 GPR1P46091 355 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 FASLGP48023 281 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 STC1P52823 247 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 LRP8Q14114 963 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 KRT81Q14533 505 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 PDK2Q15119 407 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 IFI16Q16666 785 aaKnown RBP10.34□□□□□ -0.75
VPS4B-207ENST00000591519 PHF19Q5T6S3 580 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 LRRC66Q68CR7 880 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 NCBP2-AS2Q69YL0 99 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 SLC30A9Q6PML9 568 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 ZFAND4Q86XD8 727 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 CNGA4Q8IV77 575 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 PARP9Q8IXQ6 854 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 OR4D9Q8NGE8 314 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 ARRDC2Q8TBH0 407 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 SCAMP4Q969E2 229 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 FAF2Q96CS3 445 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 AP2M1Q96CW1 435 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 CCDC42Q96M95 316 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 TAAR9Q96RI9 348 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 NUDT22Q9BRQ3 303 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 CDH19Q9H159 772 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 NHEJ1Q9H9Q4 299 aaPredicted RBP10.34□□□□□ -0.75
VPS4B-207ENST00000591519 RBM22Q9NW64 420 aaKnown RBP eCLIP10.34□□□□□ -0.75
VPS4B-207ENST00000591519 FOXJ2Q9P0K8 574 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 DNPEPQ9ULA0 475 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 NENFQ9UMX5 172 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 PCDHB11Q9Y5F2 797 aa10.34□□□□□ -0.75
VPS4B-207ENST00000591519 A0A0U1RQS6 177 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 RGSL1A5PLK6 1076 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 SFTPCP11686 197 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 ITGB6P18564 788 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 LORP23490 312 aaPredicted RBP10.33□□□□□ -0.76
VPS4B-207ENST00000591519 GJC1P36383 396 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 ACTR1BP42025 376 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 SSR1P43307 286 aaKnown RBP10.33□□□□□ -0.76
VPS4B-207ENST00000591519 ARSDP51689 593 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 MAPK10P53779 464 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 ACTR1AP61163 376 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 GPLD1P80108 840 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 SRSF6Q13247 344 aaKnown RBP10.33□□□□□ -0.76
VPS4B-207ENST00000591519 DPYSL3Q14195 570 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 SLC18A3Q16572 532 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 AMZ1Q400G9 498 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 MAP9Q49MG5 647 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 ATP13A4Q4VNC1 1196 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 ANKRD20A8PQ5CZ79 823 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 MANEAQ5SRI9 462 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 TMEM71Q6P5X7 295 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 LYPD8Q6UX82 237 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 MAP7D3Q8IWC1 876 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 SFRP1Q8N474 314 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 TC2NQ8N9U0 490 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 PATE1Q8WXA2 126 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 MRFAP1L1Q96HT8 127 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 SMIM14Q96QK8 99 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 OR2M4Q96R27 311 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 WDR24Q96S15 920 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 AGAP2Q99490 1192 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 ZNF670Q9BS34 389 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 ANP32EQ9BTT0 268 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 TDRD1Q9BXT4 1180 aaKnown RBP10.33□□□□□ -0.76
VPS4B-207ENST00000591519 HAUS2Q9NVX0 235 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 VPS18Q9P253 973 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 CTTNBP2NLQ9P2B4 639 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 CD84Q9UIB8 345 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 CNOT6Q9ULM6 557 aaKnown RBP10.33□□□□□ -0.76
VPS4B-207ENST00000591519 CHKBQ9Y259 395 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 TMEM98Q9Y2Y6 226 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms