RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 KLF15Q9UIH9 416 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 CSNK1G3Q9Y6M4 447 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 ARID1BQ8NFD5 2236 aaPredicted RBP10.34□□□□□ -0.75
SDF2-208ENST00000589788 TRIM38O00635 465 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 SCAMP1O15126 338 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 SIGLEC6O43699 453 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 HYAL3O43820 417 aaPredicted RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 CLDN7O95471 211 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 NDST3O95803 873 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 MT-CYBP00156 380 aaPredicted RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 RPLP1P05386 114 aaKnown RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 ANXA6P08133 673 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 HOXC4P09017 264 aaPredicted RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 RBP3P10745 1247 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 CKMT2P17540 419 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 RBL1P28749 1068 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 CD68P34810 354 aaPredicted RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 TRIM23P36406 574 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 GPR1P46091 355 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 STC1P52823 247 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 KIAA1024LP59773 190 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 SRP54P61011 504 aaKnown RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 ETF1P62495 437 aaKnown RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 SHC2P98077 582 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 DAB2P98082 770 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 DNAJC3Q13217 504 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 ALG11Q2TAA5 492 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 ZNF569Q5MCW4 686 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 SEL1L2Q5TEA6 688 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 ITPRIPL1Q6GPH6 555 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 RAET1GQ6H3X3 334 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 ZNF765Q7L2R6 523 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 TECPR1Q7Z6L1 1165 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 HEATR4Q86WZ0 1026 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 NRSN1Q8IZ57 195 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 ZNF567Q8N184 647 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 CBARPQ8N350 705 aaPredicted RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 PNPLA1Q8N8W4 532 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 OR56A4Q8NGH8 313 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 ADAMTS14Q8WXS8 1223 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 TSACCQ96A04 125 aaPredicted RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 FUBP1Q96AE4 644 aaKnown RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 AP2M1Q96CW1 435 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 TRIB3Q96RU7 358 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 LYSMD1Q96S90 227 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 FAM118BQ9BPY3 351 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 DUSP23Q9BVJ7 150 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 ZCCHC2Q9C0B9 1178 aaKnown RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 TCEAL2Q9H3H9 227 aaPredicted RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 CAAP1Q9H8G2 361 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 C10orf88Q9H8K7 445 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 NEUROD4Q9HD90 331 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 CUEDC1Q9NWM3 386 aaPredicted RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 PKD2L2Q9NZM6 624 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 CD84Q9UIB8 345 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 MOSPD1Q9UJG1 213 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 F5H423 210 aaPredicted RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 K7ESM1 405 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 TNFRSF10CO14798 259 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 KCNN4O15554 427 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 EFSO43281 561 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 ANXA9O76027 345 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 RECKO95980 971 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 TNFP01375 233 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 SLC4A1P02730 911 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 PYGLP06737 847 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 C1SP09871 688 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 PIRTP0C851 137 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 FAM157BP0CG42 384 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 MYCLP1P12525 358 aaPredicted RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 HK3P52790 923 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 WNT3AP56704 352 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 GNG11P61952 73 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 DPTQ07507 201 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 MPP3Q13368 585 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 C1orf61Q13536 156 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 PRPSAP1Q14558 356 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 ELOCQ15369 112 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 RPS6KA1Q15418 735 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 DEFB133Q30KQ1 61 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 XKR5Q6UX68 686 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 RFLNAQ6ZTI6 216 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 RAB44Q7Z6P3 723 aaPredicted RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 RAVER1Q8IY67 606 aaKnown RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 PELI3Q8N2H9 469 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 SLC35F6Q8N357 371 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 FSTL5Q8N475 847 aaPredicted RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 CHCHD4Q8N4Q1 142 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 IPMKQ8NFU5 416 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 SCAMP4Q969E2 229 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 TADA1Q96BN2 335 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 TBATAQ96M53 351 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 FCRL5Q96RD9 977 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 SRPK1Q96SB4 655 aaKnown RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 LRRC61Q9BV99 259 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 SCNM1Q9BWG6 230 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 FSD1LQ9BXM9 530 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 GPR63Q9BZJ6 419 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 ABCG8Q9H221 673 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 ZFYVE1Q9HBF4 777 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms