RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 VPS16Q9H269 839 aa21.57■■□□□ 1.04
CAPNS1-205ENST00000588780 ACTL8Q9H568 366 aa21.57■■□□□ 1.04
CAPNS1-205ENST00000588780 DOPEY1Q5JWR5 2465 aa21.57■■□□□ 1.04
CAPNS1-205ENST00000588780 A0A0U1RQS6 177 aa21.56■■□□□ 1.04
CAPNS1-205ENST00000588780 SIGLEC16A6NMB1 481 aa21.56■■□□□ 1.04
CAPNS1-205ENST00000588780 HTRA2O43464 458 aaPredicted RBP21.56■■□□□ 1.04
CAPNS1-205ENST00000588780 MT-ND3P03897 115 aa21.56■■□□□ 1.04
CAPNS1-205ENST00000588780 ACP5P13686 325 aa21.56■■□□□ 1.04
CAPNS1-205ENST00000588780 AMD1P17707 334 aa21.56■■□□□ 1.04
CAPNS1-205ENST00000588780 CHRNB2P17787 502 aa21.56■■□□□ 1.04
CAPNS1-205ENST00000588780 SLC10A7Q0GE19 358 aa21.56■■□□□ 1.04
CAPNS1-205ENST00000588780 IL11RAQ14626 422 aa21.56■■□□□ 1.04
CAPNS1-205ENST00000588780 CPZQ66K79 652 aa21.56■■□□□ 1.04
CAPNS1-205ENST00000588780 SCRN2Q96FV2 425 aa21.56■■□□□ 1.04
CAPNS1-205ENST00000588780 MFRPQ9BY79 579 aa21.56■■□□□ 1.04
CAPNS1-205ENST00000588780 CPNE7Q9UBL6 633 aa21.56■■□□□ 1.04
CAPNS1-205ENST00000588780 AP4E1Q9UPM8 1137 aa21.56■■□□□ 1.04
CAPNS1-205ENST00000588780 SHANK1Q9Y566 2161 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 MN1Q10571 1320 aaPredicted RBP21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 HIVEP3Q5T1R4 2406 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 ARGFXA6NJG6 315 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 SORBS2O94875 1100 aaKnown RBP21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 ATP1A1P05023 1023 aaKnown RBP21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 PYGLP06737 847 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 SYCP1Q15431 976 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 ARMC12Q5T9G4 340 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 DCUN1D2Q6PH85 259 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 TECPR1Q7Z6L1 1165 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 NDUFAF2Q8N183 169 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 CBARPQ8N350 705 aaPredicted RBP21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 BBS5Q8N3I7 341 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 AVL9Q8NBF6 648 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 EXD1Q8NHP7 514 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 SEC14L1Q92503 715 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 CNPY3Q9BT09 278 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 NOD2Q9HC29 1040 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 LHX9Q9NQ69 397 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 G3BP2Q9UN86 482 aaKnown RBP21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 PCDHGA6Q9Y5G7 932 aa21.55■■□□□ 1.04
CAPNS1-205ENST00000588780 SPENQ96T58 3664 aaKnown RBP21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 KIR2DS5A0A0G2JLQ3 304 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 A0A0G2JNG1 304 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 KIR2DS3K7RE56 304 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 SPAG6O75602 509 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 RECKO95980 971 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 SOD1P00441 154 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 F3P13726 295 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 ERCC2P18074 760 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 TRAF2Q12933 501 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 PTP4A2Q12974 167 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 KIR2DS5Q14953 304 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 MIIPQ5JXC2 388 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 LRRC66Q68CR7 880 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 PPP1R3BQ86XI6 285 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 TICAM1Q8IUC6 712 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 ARHGAP12Q8IWW6 846 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 TRIM48Q8IWZ4 208 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 THAP4Q8WY91 577 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 NUDCD1Q96RS6 583 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 ERRFI1Q9UJM3 462 aaPredicted RBP21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 ZNF451Q9Y4E5 1061 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 LRBAP50851 2863 aa21.54■■□□□ 1.04
CAPNS1-205ENST00000588780 OR5K4A6NMS3 321 aa21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 C21orf140B9A014 251 aa21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 VARSP26640 1264 aaKnown RBP21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 HSPA9P38646 679 aaKnown RBP21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 RIPPLY3P57055 190 aa21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 RPL7AP62424 266 aaKnown RBP21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 CHRNA6Q15825 494 aa21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 PPP6R3Q5H9R7 873 aaPredicted RBP21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 RFX8Q6ZV50 586 aa21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 PHYKPLQ8IUZ5 450 aa21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 SPOCK2Q92563 424 aa21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 C5orf34Q96MH7 638 aa21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 AGAP2Q99490 1192 aa21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 RIOK2Q9BVS4 552 aaKnown RBP21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 ING2Q9H160 280 aa21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 OSGEPL1Q9H4B0 414 aa21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 PCDHGA9Q9Y5G4 932 aaKnown RBP21.53■■□□□ 1.04
CAPNS1-205ENST00000588780 CELSR2Q9HCU4 2923 aa21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 LILRA5A6NI73 299 aa21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 DPM1O60762 260 aa21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 UBXN7O94888 489 aa21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 PGLSO95336 258 aa21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 UNGP13051 313 aaPredicted RBP21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 LEPRP48357 1165 aaKnown RBP21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 GSCP56915 257 aaPredicted RBP21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 MAXP61244 160 aa21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 RPS18P62269 152 aaKnown RBP21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 RPS15P62841 145 aaKnown RBP21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 CA9Q16790 459 aa21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 JMJD6Q6NYC1 403 aaPredicted RBP21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 CYB5D1Q6P9G0 228 aa21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 TP53INP2Q8IXH6 220 aa21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 NPWQ8N729 165 aa21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 NSMCE1Q8WV22 266 aa21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 TCTN2Q96GX1 697 aa21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 ZNF599Q96NL3 588 aa21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 PCDHB18PQ96TA0 734 aa21.52■■□□□ 1.04
CAPNS1-205ENST00000588780 ZNF768Q9H5H4 540 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms