RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 SERPINA9Q86WD7 417 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 CKAP2Q8WWK9 683 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 ZNF358Q9NW07 568 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 MED16Q9Y2X0 877 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 PLXNB3Q9ULL4 1909 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 A0A1W2PQF6 199 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 PSMD11O00231 422 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 PFDN6O15212 129 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 WISP3O95389 354 aaPredicted RBP25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 KLF8O95600 359 aaPredicted RBP25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 GSTA1P08263 222 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 ELFN1P0C7U0 828 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 FDXRP22570 491 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 ETV3P41162 512 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 PTGER3P43115 390 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 MRPS21P82921 87 aaKnown RBP25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 TAF1BQ53T94 588 aaPredicted RBP25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 PIP5KL1Q5T9C9 394 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 SDE2Q6IQ49 451 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 CENPLQ8N0S6 344 aaPredicted RBP25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 AADATQ8N5Z0 425 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 TXNDC5Q8NBS9 432 aaKnown RBP25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 OR2T3Q8NH03 318 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 DYDC1Q8WWB3 177 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 FAM3CQ92520 227 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 P2RY12Q9H244 342 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 PRDM6Q9NQX0 595 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 CD84Q9UIB8 345 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 TLK1Q9UKI8 766 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 ANKRD6Q9Y2G4 727 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 COL6A3P12111 3177 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 RGSL1A5PLK6 1076 aa25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 MID1O15344 667 aa25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 RNASEH1O60930 286 aaKnown RBP25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 ADH1BP00325 375 aa25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 LIG3P49916 1009 aa25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 SLC12A2P55011 1212 aa25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 ATP13A5Q4VNC0 1218 aa25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 N4BP2L1Q5TBK1 243 aaPredicted RBP25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 HHATQ5VTY9 493 aa25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 KYAT3Q6YP21 454 aaKnown RBP25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 TRMT11Q7Z4G4 463 aaKnown RBP25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 DTX3LQ8TDB6 740 aa25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 CCDC97Q96F63 343 aaPredicted RBP25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 TSPAN17Q96FV3 270 aa25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 PAIP2Q9BPZ3 127 aaKnown RBP25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 DUSP12Q9UNI6 340 aa25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 ACOT9Q9Y305 439 aa25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 LRRK1Q38SD2 2015 aa25.86■■□□□ 1.73
SCAMP4-210ENST00000588555 COL9A1P20849 921 aa25.85■■□□□ 1.73
SCAMP4-210ENST00000588555 ACRV1P26436 265 aa25.85■■□□□ 1.73
SCAMP4-210ENST00000588555 FMO4P31512 558 aa25.85■■□□□ 1.73
SCAMP4-210ENST00000588555 IL9RQ01113 521 aa25.85■■□□□ 1.73
SCAMP4-210ENST00000588555 STARD3Q14849 445 aa25.85■■□□□ 1.73
SCAMP4-210ENST00000588555 SEPT7Q16181 437 aaKnown RBP25.85■■□□□ 1.73
SCAMP4-210ENST00000588555 RAVER1Q8IY67 606 aaKnown RBP25.85■■□□□ 1.73
SCAMP4-210ENST00000588555 NXPE1Q8N323 547 aa25.85■■□□□ 1.73
SCAMP4-210ENST00000588555 SCAMP4Q969E2 229 aa25.85■■□□□ 1.73
SCAMP4-210ENST00000588555 RAB7BQ96AH8 199 aa25.85■■□□□ 1.73
SCAMP4-210ENST00000588555 COQ10AQ96MF6 247 aa25.85■■□□□ 1.73
SCAMP4-210ENST00000588555 WRAP53Q9BUR4 548 aaKnown RBP25.85■■□□□ 1.73
SCAMP4-210ENST00000588555 MKRN2Q9H000 416 aaKnown RBP25.85■■□□□ 1.73
SCAMP4-210ENST00000588555 FAM83DQ9H4H8 585 aa25.85■■□□□ 1.73
SCAMP4-210ENST00000588555 TMEM216Q9P0N5 145 aa25.85■■□□□ 1.73
SCAMP4-210ENST00000588555 PLIN3O60664 434 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 HOXB2P14652 356 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 C5AR1P21730 350 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 CD72P21854 359 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 RPS14P62263 151 aaKnown RBP25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 TMEM52BQ4KMG9 183 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 CTSL3PQ5NE16 218 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 HENMT1Q5T8I9 393 aaKnown RBP25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 ZNF776Q68DI1 518 aaPredicted RBP25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 C16orf46Q6P387 395 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 TAX1BP1Q86VP1 789 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 LCA5Q86VQ0 697 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 CACUL1Q86Y37 369 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 SPNS2Q8IVW8 549 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 ARMC2Q8NEN0 867 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 CDH19Q9H159 772 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 FBRSQ9HAH7 460 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 RAD18Q9NS91 495 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 CRLS1Q9UJA2 301 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 TMPRSS11EQ9UL52 423 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 MTF2Q9Y483 593 aaPredicted RBP25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 FADS3Q9Y5Q0 445 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 SRRM3A6NNA2 597 aaPredicted RBP25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 COL6A2P12110 1019 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 PKMP14618 531 aaKnown RBP25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 FBXO43Q4G163 708 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 AGBL4Q5VU57 503 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 LYPLAL1Q5VWZ2 237 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 PIM3Q86V86 326 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 BOCQ9BWV1 1114 aa25.84■■□□□ 1.73
SCAMP4-210ENST00000588555 A0A087X1B8 175 aa25.83■■□□□ 1.73
SCAMP4-210ENST00000588555 DNAJC6O75061 913 aa25.83■■□□□ 1.73
SCAMP4-210ENST00000588555 PROCP04070 461 aa25.83■■□□□ 1.73
SCAMP4-210ENST00000588555 PPARGP37231 505 aaPredicted RBP25.83■■□□□ 1.73
SCAMP4-210ENST00000588555 DLG1Q12959 904 aa25.83■■□□□ 1.73
SCAMP4-210ENST00000588555 ITGA9Q13797 1035 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms