RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 SLC39A13Q96H72 371 aa6.79□□□□□ -1.32
TPM4-210ENST00000588507 ZNF514Q96K75 400 aaPredicted RBP6.79□□□□□ -1.32
TPM4-210ENST00000588507 TWNKQ96RR1 684 aa6.79□□□□□ -1.32
TPM4-210ENST00000588507 NT5C1AQ9BXI3 368 aa6.79□□□□□ -1.32
TPM4-210ENST00000588507 LHPPQ9H008 270 aa6.79□□□□□ -1.32
TPM4-210ENST00000588507 CUEDC2Q9H467 287 aa6.79□□□□□ -1.32
TPM4-210ENST00000588507 WDR26Q9H7D7 661 aa6.79□□□□□ -1.32
TPM4-210ENST00000588507 LRRC4Q9HBW1 653 aa6.79□□□□□ -1.32
TPM4-210ENST00000588507 OGFRQ9NZT2 677 aa6.79□□□□□ -1.32
TPM4-210ENST00000588507 PTGFRNQ9P2B2 879 aa6.79□□□□□ -1.32
TPM4-210ENST00000588507 CBLCQ9ULV8 474 aa6.79□□□□□ -1.32
TPM4-210ENST00000588507 SUFUQ9UMX1 484 aa6.79□□□□□ -1.32
TPM4-210ENST00000588507 TLR6Q9Y2C9 796 aa6.79□□□□□ -1.32
TPM4-210ENST00000588507 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.79□□□□□ -1.32
TPM4-210ENST00000588507 TENM1Q9UKZ4 2725 aa6.79□□□□□ -1.32
TPM4-210ENST00000588507 ANKRD36A6QL64 1941 aa6.79□□□□□ -1.32
TPM4-210ENST00000588507 A0A087X1B8 175 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 LILRA5A6NI73 299 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 A8MV72 311 aaPredicted RBP6.78□□□□□ -1.32
TPM4-210ENST00000588507 C9J4A7 227 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 AGPSO00116 658 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 TEX33O43247 280 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 KLF7O75840 302 aaPredicted RBP6.78□□□□□ -1.32
TPM4-210ENST00000588507 APOEP02649 317 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 CEACAM5P06731 702 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 PVRP15151 417 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 AMD1P17707 334 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 SLC8A3P57103 927 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 ELP6Q0PNE2 266 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 SNTB1Q13884 538 aaKnown RBP6.78□□□□□ -1.32
TPM4-210ENST00000588507 PPP1R32Q7Z5V6 425 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 C4orf32Q8N8J7 132 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 FAM222BQ8WU58 562 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 PIGTQ969N2 578 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 ELMO3Q96BJ8 720 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 BTN2A3PQ96KV6 586 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 SERPINB11Q96P15 392 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 STRA6Q9BX79 667 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 OSBPL1AQ9BXW6 950 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 DNAI2Q9GZS0 605 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 KCND1Q9NSA2 647 aa6.78□□□□□ -1.32
TPM4-210ENST00000588507 C17orf113A0A1B0GUU1 675 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 KRIT1O00522 736 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 CES2O00748 559 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 IKBKBO14920 756 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 DNAJC6O75061 913 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 KLHL18O94889 574 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 JCHAINP01591 159 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 EBLN1P0CF75 366 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 MYCLP1P12525 358 aaPredicted RBP6.77□□□□□ -1.33
TPM4-210ENST00000588507 PRKCSHP14314 528 aaPredicted RBP6.77□□□□□ -1.33
TPM4-210ENST00000588507 CREB1P16220 341 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 XPAP23025 273 aaPredicted RBP6.77□□□□□ -1.33
TPM4-210ENST00000588507 RORAP35398 523 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 FOLR3P41439 243 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 SLC20A2Q08357 652 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 STK3Q13188 491 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 BIRC3Q13489 604 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 PLA2G4EQ3MJ16 856 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 FLYWCH1Q4VC44 716 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 FAM92BQ6ZTR7 304 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 FGD2Q7Z6J4 655 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 CCDC71Q8IV32 467 aaPredicted RBP6.77□□□□□ -1.33
TPM4-210ENST00000588507 PLPP6Q8IY26 295 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 SYTL1Q8IYJ3 562 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 GUF1Q8N442 669 aaKnown RBP6.77□□□□□ -1.33
TPM4-210ENST00000588507 MARVELD2Q8N4S9 558 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 LRRC17Q8N6Y2 441 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 DCAF4L2Q8NA75 395 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 OR6K2Q8NGY2 324 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 OR8K5Q8NH50 307 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 ZNF516Q92618 1163 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 ZNF274Q96GC6 653 aaPredicted RBP6.77□□□□□ -1.33
TPM4-210ENST00000588507 ZDHHC12Q96GR4 267 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 CDK5RAP3Q96JB5 506 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 SLC41A2Q96JW4 573 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 JAKMIP1Q96N16 626 aaKnown RBP6.77□□□□□ -1.33
TPM4-210ENST00000588507 RPRD1AQ96P16 312 aaPredicted RBP6.77□□□□□ -1.33
TPM4-210ENST00000588507 ESYT1Q9BSJ8 1104 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 BEX2Q9BXY8 128 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.77□□□□□ -1.333e-9■■■□□ 17.9
TPM4-210ENST00000588507 KIAA1586Q9HCI6 787 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 SLC6A20Q9NP91 592 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 PLA2G3Q9NZ20 509 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 CNOT8Q9UFF9 292 aaKnown RBP6.77□□□□□ -1.33
TPM4-210ENST00000588507 RCAN3Q9UKA8 241 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 TBC1D30Q9Y2I9 924 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 PTRH2Q9Y3E5 179 aaKnown RBP6.77□□□□□ -1.33
TPM4-210ENST00000588507 PCM1Q15154 2024 aa6.77□□□□□ -1.33
TPM4-210ENST00000588507 MBD3L4A6NDZ8 208 aaPredicted RBP6.76□□□□□ -1.33
TPM4-210ENST00000588507 MBD3L5A6NJ08 208 aaPredicted RBP6.76□□□□□ -1.33
TPM4-210ENST00000588507 FAM227AF5H4B4 570 aa6.76□□□□□ -1.33
TPM4-210ENST00000588507 CLDN11O75508 207 aa6.76□□□□□ -1.33
TPM4-210ENST00000588507 UBXN7O94888 489 aa6.76□□□□□ -1.33
TPM4-210ENST00000588507 EML2O95834 649 aa6.76□□□□□ -1.33
TPM4-210ENST00000588507 RHOCP08134 193 aa6.76□□□□□ -1.33
TPM4-210ENST00000588507 VSIG8P0DPA2 414 aa6.76□□□□□ -1.33
TPM4-210ENST00000588507 MYBL2P10244 700 aa6.76□□□□□ -1.33
TPM4-210ENST00000588507 RPS6KB1P23443 525 aa6.76□□□□□ -1.33
TPM4-210ENST00000588507 ETV3P41162 512 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms