RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 CBLBQ13191 982 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 PDE1CQ14123 709 aaPredicted RBP10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 SMAD1Q15797 465 aaKnown RBP10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 ANKRD20A4Q4UJ75 823 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 TRIM61Q5EBN2 209 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 KCTD16Q68DU8 428 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 TCEAL6Q6IPX3 200 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 PSAPL1Q6NUJ1 521 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 SLC23A3Q6PIS1 610 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 ADAMTSL4Q6UY14 1074 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 NLRP9Q7RTR0 991 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 TMEM135Q86UB9 458 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 DCLK2Q8N568 766 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 DTX3LQ8TDB6 740 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 BTN2A2Q8WVV5 523 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 PEX13Q92968 403 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 TCEAL3Q969E4 200 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 ZNF669Q96BR6 464 aaPredicted RBP10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 COX14Q96I36 57 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 HIC2Q96JB3 615 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 ZSCAN5AQ9BUG6 496 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 CDH19Q9H159 772 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 ASB8Q9H765 288 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 WDR26Q9H7D7 661 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 ANKZF1Q9H8Y5 726 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 CAPN10Q9HC96 672 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 SAYSD1Q9NPB0 183 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 SAMD15Q9P1V8 674 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 SUSD2Q9UGT4 822 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 GMEB2Q9UKD1 530 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 APPL1Q9UKG1 709 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 PNMA8BQ9ULN7 279 aaPredicted RBP10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 ANKRD6Q9Y2G4 727 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 SNX11Q9Y5W9 270 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 OAS3Q9Y6K5 1087 aaKnown RBP10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 RPS6KL1Q9Y6S9 549 aa10.63□□□□□ -0.71
SMARCA4-213ENST00000587988 TMEM131Q92545 1883 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 TMEM202A6NGA9 273 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 AGAP14A8MT82 685 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 GOLGA8KD6RF30 607 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 GOLGA8TH3BQL2 631 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 MTX2O75431 263 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 USP1O94782 785 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 VAPBO95292 243 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 FUCA1P04066 466 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 PYGLP06737 847 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 HOXC4P09017 264 aaPredicted RBP10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 MYCLP1P12525 358 aaPredicted RBP10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 PGAM1P18669 254 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 FOXN2P32314 431 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 CTSKP43235 329 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 ARCN1P48444 511 aaKnown RBP10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 POLD2P49005 469 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 C21orf59P57076 290 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 NXPH1P58417 271 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 PRAMEP78395 509 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 OVGP1Q12889 678 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 GRIK2Q13002 908 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 NFATC2Q13469 925 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 FZD2Q14332 565 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 HLTFQ14527 1009 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 SEMA3AQ14563 771 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 NFATC4Q14934 902 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 TEAD4Q15561 434 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 KIF19Q2TAC6 998 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 KHDC1Q4VXA5 237 aaKnown RBP10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 ZRANB3Q5FWF4 1079 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 PRAMEF14Q5SWL7 426 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 PDPK2PQ6A1A2 396 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 ENPP7Q6UWV6 458 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 CENPUQ71F23 418 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 ASCL5Q7RTU5 278 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 SNX20Q7Z614 316 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 IQCHQ86VS3 1027 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 CCDC25Q86WR0 208 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 IFT20Q8IY31 132 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 PIANPQ8IYJ0 282 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 ZBED8Q8IZ13 594 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 UNC5BQ8IZJ1 945 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 FBXO36Q8NEA4 188 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 OR6P1Q8NGX9 317 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 CEP76Q8TAP6 659 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 FAM174AQ8TBP5 190 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 GLYATL1Q969I3 302 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 LRRC39Q96DD0 335 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 CCDC97Q96F63 343 aaPredicted RBP10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 CFAP36Q96G28 342 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 PARD6AQ9NPB6 346 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 MRPL40Q9NQ50 206 aaKnown RBP10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 PHPT1Q9NRX4 125 aaPredicted RBP10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 MARCH4Q9P2E8 410 aaPredicted RBP10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 NCDNQ9UBB6 729 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 NFU1Q9UMS0 254 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 SLC6A14Q9UN76 642 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 TMEM98Q9Y2Y6 226 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 SLC30A1Q9Y6M5 507 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 FAM169AQ9Y6X4 670 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 PCDH15Q96QU1 1955 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 GPR179Q6PRD1 2367 aa10.62□□□□□ -0.71
SMARCA4-213ENST00000587988 TRBV5-4A0A0C4DH59 114 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms