RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 TTC7BQ86TV6 843 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 HCAR2Q8TDS4 363 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 UCMAQ8WVF2 138 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 KCNJ9Q92806 393 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 SGF29Q96ES7 293 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 TRMT61BQ9BVS5 477 aaKnown RBP19.72■□□□□ 0.75
TRIM47-204ENST00000587339 DKK3Q9UBP4 350 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 MARCOQ9UEW3 520 aaPredicted RBP19.72■□□□□ 0.75
TRIM47-204ENST00000587339 CRLS1Q9UJA2 301 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 TRBV5-4A0A0C4DH59 114 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 EDDM13A0A1B0GTR0 161 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 DLX3O60479 287 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 HLA-EP13747 358 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 ZNF7P17097 686 aaPredicted RBP19.72■□□□□ 0.75
TRIM47-204ENST00000587339 UGT1A6P19224 532 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 UGT1A1P22309 533 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 UGT1A4P22310 534 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 UGT1A3P35503 534 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 UGT1A5P35504 534 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 LTBRP36941 435 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 ARFIP2P53365 341 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 POM121L1PQ3SYA9 428 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 LYPLAL1Q5VWZ2 237 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 SERPINA13PQ6UXR4 307 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 RBFAQ8N0V3 343 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 PIWIL2Q8TC59 973 aaKnown RBP19.72■□□□□ 0.75
TRIM47-204ENST00000587339 PLEKHG4BQ96PX9 1271 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 GPR21Q99679 349 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 RPP25Q9BUL9 199 aaKnown RBP19.72■□□□□ 0.75
TRIM47-204ENST00000587339 GATA5Q9BWX5 397 aaPredicted RBP19.72■□□□□ 0.75
TRIM47-204ENST00000587339 P2RY12Q9H244 342 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 KDM4CQ9H3R0 1056 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 KCNK13Q9HB14 408 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 PCDHB1Q9Y5F3 818 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 COL4A3Q01955 1670 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 GOLGA8CPA6NN73 597 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 C16orf96A6NNT2 1141 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 TMEM114B3SHH9 223 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 E5RI56 91 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 HGSO14964 777 aaPredicted RBP19.71■□□□□ 0.75
TRIM47-204ENST00000587339 NIPSNAP2O75323 286 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 ECI2O75521 394 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 PRNPP04156 253 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 C1SP09871 688 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 CD1DP15813 335 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 TIMP2P16035 220 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 CHRM3P20309 590 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 CD9P21926 228 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 ACRV1P26436 265 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 VIPR1P32241 457 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 EIF2DP41214 584 aaKnown RBP19.71■□□□□ 0.75
TRIM47-204ENST00000587339 ASPHQ12797 758 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 SETMARQ53H47 684 aaPredicted RBP19.71■□□□□ 0.75
TRIM47-204ENST00000587339 PAQR3Q6TCH7 311 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 ISCA2Q86U28 154 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 SORT1Q99523 831 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 CLPBQ9H078 707 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 ALG9Q9H6U8 611 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 PCDH12Q9NPG4 1184 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 MTCH2Q9Y6C9 303 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 OAS3Q9Y6K5 1087 aaKnown RBP19.71■□□□□ 0.75
TRIM47-204ENST00000587339 SCN8AQ9UQD0 1980 aa19.71■□□□□ 0.75
TRIM47-204ENST00000587339 ANKRD65E5RJM6 399 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 KPNA3O00505 521 aaPredicted RBP19.7■□□□□ 0.74
TRIM47-204ENST00000587339 ZBTB14O43829 449 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 DCTN3O75935 186 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 KAT7O95251 611 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 ATP5F1P24539 256 aaPredicted RBP19.7■□□□□ 0.74
TRIM47-204ENST00000587339 ARRB2P32121 409 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 SKIV2L2P42285 1042 aaKnown RBP19.7■□□□□ 0.74
TRIM47-204ENST00000587339 SPINT3P49223 89 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 NAGLUP54802 743 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 ELAVL3Q14576 367 aaKnown RBP19.7■□□□□ 0.74
TRIM47-204ENST00000587339 ITPRIPL2Q3MIP1 535 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 PREPLQ4J6C6 727 aaPredicted RBP19.7■□□□□ 0.74
TRIM47-204ENST00000587339 C9orf64Q5T6V5 341 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 WDR75Q8IWA0 830 aaKnown RBP19.7■□□□□ 0.74
TRIM47-204ENST00000587339 FITM2Q8N6M3 262 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 OR8D1Q8WZ84 308 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 CCDC126Q96EE4 140 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 MSLNLQ96KJ4 702 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 LRRC37BQ96QE4 947 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 TMEM120AQ9BXJ8 343 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 TMEM245Q9H330 911 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 PKD2L2Q9NZM6 624 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 TRMT6Q9UJA5 497 aaKnown RBP19.7■□□□□ 0.74
TRIM47-204ENST00000587339 DNAJC16Q9Y2G8 782 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 TNRC18O15417 2968 aaPredicted RBP19.7■□□□□ 0.74
TRIM47-204ENST00000587339 AGAP14A8MT82 685 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 HSPA4LO95757 839 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 CA5AP35218 305 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 PFKPQ01813 784 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 SETDB1Q15047 1291 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 ATG14Q6ZNE5 492 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 NXPE1Q8N323 547 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 GBP7Q8N8V2 638 aaPredicted RBP19.7■□□□□ 0.74
TRIM47-204ENST00000587339 CHFRQ96EP1 664 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 BOCQ9BWV1 1114 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 KCNK4Q9NYG8 393 aa19.7■□□□□ 0.74
TRIM47-204ENST00000587339 GALPQ9UBC7 116 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms