RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 ARSEP51690 589 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 FOXK1P85037 733 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 SLC25A11Q02978 314 aaKnown RBP14.34□□□□□ -0.11
SDF2-202ENST00000585428 KLHL30Q0D2K2 578 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 ABHD18Q0P651 414 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 MMRN1Q13201 1228 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 UBAP2LQ14157 1087 aaKnown RBP14.34□□□□□ -0.11
SDF2-202ENST00000585428 CRTC2Q53ET0 693 aaPredicted RBP14.34□□□□□ -0.11
SDF2-202ENST00000585428 CEACAM20Q6UY09 585 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 CHST15Q7LFX5 561 aaPredicted RBP14.34□□□□□ -0.11
SDF2-202ENST00000585428 ARRDC2Q8TBH0 407 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 FATE1Q969F0 183 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 SH3KBP1Q96B97 665 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 LYSMD1Q96S90 227 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 EFHD1Q9BUP0 239 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 POLR1EQ9GZS1 481 aaKnown RBP14.34□□□□□ -0.11
SDF2-202ENST00000585428 RMI1Q9H9A7 625 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 GPN2Q9H9Y4 310 aaPredicted RBP14.34□□□□□ -0.11
SDF2-202ENST00000585428 APMAPQ9HDC9 416 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 RCOR3Q9P2K3 495 aaPredicted RBP14.34□□□□□ -0.11
SDF2-202ENST00000585428 ANAPC2Q9UJX6 822 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 CHKBQ9Y259 395 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 OAS3Q9Y6K5 1087 aaKnown RBP14.34□□□□□ -0.11
SDF2-202ENST00000585428 CLEC18AA5D8T8 446 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 ASMTLO95671 621 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 CCNCP24863 283 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 GARSP41250 739 aaKnown RBP14.33□□□□□ -0.12
SDF2-202ENST00000585428 EPHA4P54764 986 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 RPL26P61254 145 aaKnown RBP14.33□□□□□ -0.12
SDF2-202ENST00000585428 DSC2Q02487 901 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 ITKQ08881 620 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 GALNT2Q10471 571 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 PAFAH1B3Q15102 231 aaKnown RBP14.33□□□□□ -0.12
SDF2-202ENST00000585428 IGFBP7Q16270 282 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 SNAP47Q5SQN1 464 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 CLEC18BQ6UXF7 455 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 LYSMD3Q7Z3D4 306 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 SLC9B2Q86UD5 537 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 UNC5BQ8IZJ1 945 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 AOPEPQ8N6M6 819 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 CLEC18CQ8NCF0 446 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 APOBEC4Q8WW27 367 aaKnown RBP14.33□□□□□ -0.12
SDF2-202ENST00000585428 ABHD17AQ96GS6 310 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 TSGA13Q96PP4 275 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 TDRD1Q9BXT4 1180 aaKnown RBP14.33□□□□□ -0.12
SDF2-202ENST00000585428 TRIT1Q9H3H1 467 aaKnown RBP14.33□□□□□ -0.12
SDF2-202ENST00000585428 AMACRQ9UHK6 382 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 DNPEPQ9ULA0 475 aa14.33□□□□□ -0.12
SDF2-202ENST00000585428 RPL26L1Q9UNX3 145 aaKnown RBP14.33□□□□□ -0.12
SDF2-202ENST00000585428 TLN1Q9Y490 2541 aaKnown RBP14.32□□□□□ -0.12
SDF2-202ENST00000585428 RGSL1A5PLK6 1076 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 STK17BO94768 372 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 DLGAP3O95886 979 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 CD48P09326 243 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 MAN1A1P33908 653 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 SPINT3P49223 89 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 ZNF165P49910 485 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 CLCNKAP51800 687 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 EPHB1P54762 984 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 NIPAL4Q0D2K0 466 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 CDC20Q12834 499 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 NFATC2Q13469 925 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 CCDC122Q5T0U0 273 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 HENMT1Q5T8I9 393 aaKnown RBP14.32□□□□□ -0.12
SDF2-202ENST00000585428 KIAA1143Q96AT1 154 aaPredicted RBP14.32□□□□□ -0.12
SDF2-202ENST00000585428 BTBD6Q96KE9 485 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 NAP1L5Q96NT1 182 aaPredicted RBP14.32□□□□□ -0.12
SDF2-202ENST00000585428 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.32□□□□□ -0.12
SDF2-202ENST00000585428 THAP2Q9H0W7 228 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 FAM83DQ9H4H8 585 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 ZNF71Q9NQZ8 489 aaPredicted RBP14.32□□□□□ -0.12
SDF2-202ENST00000585428 RBM22Q9NW64 420 aaKnown RBP eCLIP14.32□□□□□ -0.12
SDF2-202ENST00000585428 ANKMY1Q9P2S6 941 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 IP6K2Q9UHH9 426 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 KCNK6Q9Y257 313 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 ADGRG1Q9Y653 693 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 SPTA1P02549 2419 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 RELNP78509 3460 aa14.32□□□□□ -0.12
SDF2-202ENST00000585428 KIR2DS5A0A0G2JLQ3 304 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 A0A0G2JNG1 304 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 OR5K4A6NMS3 321 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 FADS2P1A8MWK0 482 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 KIR2DS3K7RE56 304 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 POLR1CO15160 346 aaPredicted RBP14.31□□□□□ -0.12
SDF2-202ENST00000585428 NUAK1O60285 661 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 PRKAR1AP10644 381 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 F3P13726 295 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 XRCC1P18887 633 aaPredicted RBP14.31□□□□□ -0.12
SDF2-202ENST00000585428 OAS2P29728 719 aaKnown RBP14.31□□□□□ -0.12
SDF2-202ENST00000585428 MAP7Q14244 749 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 KIR2DS5Q14953 304 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 NR1I3Q14994 352 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 ATP13A4Q4VNC1 1196 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 HGSNATQ68CP4 663 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 NCBP2-AS2Q69YL0 99 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 TIGD7Q6NT04 549 aaPredicted RBP14.31□□□□□ -0.12
SDF2-202ENST00000585428 C9orf43Q8TAL5 461 aaPredicted RBP14.31□□□□□ -0.12
SDF2-202ENST00000585428 EID2BQ96D98 161 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 BPIFA3Q9BQP9 254 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 HERPUD2Q9BSE4 406 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms