RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 CD84Q9UIB8 345 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 TMPRSS11EQ9UL52 423 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 VPS9D1Q9Y2B5 631 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 IKBKGQ9Y6K9 419 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 PLXNB3Q9ULL4 1909 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 BDP1A6H8Y1 2624 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 IGLV3-16A0A075B6K0 115 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 IGHV1OR15-9A0A0B4J2B8 117 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 CCDC163A0A0D9SF12 145 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 HMX2A2RU54 273 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 LRRC72A6NJI9 287 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 FADS2P1A8MWK0 482 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 GPR39O43194 453 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 LATO43561 262 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 OPA1O60313 960 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 FAM155BO75949 473 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 SEMA4FO95754 770 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 PYGLP06737 847 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 MYZAPP0CAP1 466 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 ACRV1P26436 265 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 CD6P30203 668 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 CD151P48509 253 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 ADARP55265 1226 aaKnown RBP16.03■□□□□ 0.16
SS18-226ENST00000585241 PPP2CBP62714 309 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 PPP2CAP67775 309 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 ITIH4Q14624 930 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 ATP13A5Q4VNC0 1218 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 TAOK1Q7L7X3 1001 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 BMP8AQ7Z5Y6 402 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 FAM124AQ86V42 546 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 NXPE1Q8N323 547 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 OTUD6BQ8N6M0 293 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 TP53I13Q8NBR0 393 aaPredicted RBP16.03■□□□□ 0.16
SS18-226ENST00000585241 DENND6BQ8NEG7 585 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 LPGAT1Q92604 370 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 ISL2Q96A47 359 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 SPATA16Q9BXB7 569 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 TXNDC16Q9P2K2 825 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 CTNNAL1Q9UBT7 734 aa16.03■□□□□ 0.16
SS18-226ENST00000585241 CORO1CQ9ULV4 474 aaPredicted RBP16.03■□□□□ 0.16
SS18-226ENST00000585241 FNDC3AQ9Y2H6 1198 aaKnown RBP16.03■□□□□ 0.16
SS18-226ENST00000585241 TBC1D3DA0A087WVF3 549 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 TBC1D3IA0A087WXS9 549 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 TBC1D3EA0A087X179 549 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 TBC1D3KA0A087X1G2 549 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 TBC1D3FA6NER0 549 aaPredicted RBP16.02■□□□□ 0.16
SS18-226ENST00000585241 TBC1D3LB9A6J9 549 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 PFDN6O15212 129 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 KRT38O76015 456 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 TBC1D3HP0C7X1 549 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 TDGF1P13385 188 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 UGT1A6P19224 532 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 UGT1A1P22309 533 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 UGT1A4P22310 534 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 SPRP35270 261 aaPredicted RBP16.02■□□□□ 0.16
SS18-226ENST00000585241 UGT1A3P35503 534 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 UGT1A5P35504 534 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 PPARGP37231 505 aaPredicted RBP16.02■□□□□ 0.16
SS18-226ENST00000585241 CCR5P51681 352 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 DNAJC3Q13217 504 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 DBN1Q16643 649 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 WSCD2Q2TBF2 565 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 ZNF789Q5FWF6 425 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 LGSNQ5TDP6 509 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 TBC1D3GQ6DHY5 549 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 TBC1D3CQ6IPX1 549 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 LDB1Q86U70 411 aaPredicted RBP16.02■□□□□ 0.16
SS18-226ENST00000585241 SERPINA9Q86WD7 417 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 TBC1D3Q8IZP1 549 aaPredicted RBP16.02■□□□□ 0.16
SS18-226ENST00000585241 DDHD1Q8NEL9 900 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 MTBPQ96DY7 904 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 MRRFQ96E11 262 aaKnown RBP16.02■□□□□ 0.16
SS18-226ENST00000585241 TOE1Q96GM8 510 aaKnown RBP16.02■□□□□ 0.16
SS18-226ENST00000585241 VPS39Q96JC1 886 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 LENG8Q96PV6 779 aaPredicted RBP16.02■□□□□ 0.16
SS18-226ENST00000585241 KLF6Q99612 283 aaPredicted RBP16.02■□□□□ 0.16
SS18-226ENST00000585241 GPR22Q99680 433 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 C1QTNF7Q9BXJ2 289 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 SLC17A9Q9BYT1 436 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 TPSD1Q9BZJ3 242 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 PCED1AQ9H1Q7 454 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 FAM96AQ9H5X1 160 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 FBXO6Q9NRD1 293 aaPredicted RBP16.02■□□□□ 0.16
SS18-226ENST00000585241 CRLS1Q9UJA2 301 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 CYP8B1Q9UNU6 501 aa16.02■□□□□ 0.16
SS18-226ENST00000585241 IQANK1A0A1B0GTG1 560 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 TLDC2A0PJX2 215 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 GOLGA6L10A6NI86 522 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 SMIM23A6NLE4 172 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 AXIN1O15169 862 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 KRT37O76014 449 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 HAUS5O94927 633 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 SYF2O95926 243 aaKnown RBP16.01■□□□□ 0.15
SS18-226ENST00000585241 ITGA2BP08514 1039 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 F7P08709 466 aaPredicted RBP16.01■□□□□ 0.15
SS18-226ENST00000585241 SNRPAP09012 282 aaKnown RBP16.01■□□□□ 0.15
SS18-226ENST00000585241 RPS3P23396 243 aaKnown RBP eCLIP16.01■□□□□ 0.15
SS18-226ENST00000585241 PMLP29590 882 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 PTGER3P43115 390 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 POLD2P49005 469 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms