RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 GATCO43716 136 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 SNAPINO95295 136 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 APOC1P02654 83 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 KITP10721 976 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 HPGDP15428 266 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 F8A1P23610 371 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 TEKQ02763 1124 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 PCDH1Q08174 1060 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 MTM1Q13496 603 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 PCBP1Q15365 356 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 SNRNP35Q16560 246 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 NHSL2Q5HYW2 709 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 EEF1DP3Q658K8 133 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 MAP4K3Q8IVH8 894 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 LGI2Q8N0V4 545 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 OR52H1Q8NGJ2 320 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 TMEM174Q8WUU8 243 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 DDX1Q92499 740 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 TFAP2CQ92754 450 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 ALKBH8Q96BT7 664 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 DACH2Q96NX9 599 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 AP5M1Q9H0R1 490 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 SAV1Q9H4B6 383 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 ST6GALNAC4Q9H4F1 302 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 MALT1Q9UDY8 824 aa11.85□□□□□ -0.51
CDK5RAP3-232ENST00000584168 ZNF487B1APH4 448 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 GPR25O00155 361 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 SMIM10L2AP0DMW4 78 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 SMIM10L2BP0DMW5 78 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 DNAJB1P25685 340 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 HLA-FP30511 346 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 SEPHS1P49903 392 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 ARFIP1P53367 373 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 OR2B6P58173 313 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 ABRQ12979 859 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 PDIA2Q13087 525 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 AQP6Q13520 282 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 FSCN1Q16658 493 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 C2CD6Q53TS8 623 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 KRT39Q6A163 491 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 RETSATQ6NUM9 610 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 LETMD1Q6P1Q0 360 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 BRAT1Q6PJG6 821 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 CFAP77Q6ZQR2 320 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 SYDE1Q6ZW31 735 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 SPATC1Q76KD6 591 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 STX12Q86Y82 276 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 CELF2-AS1Q8N7Q2 184 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 MCUQ8NE86 351 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 OR4M2Q8NGB6 313 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 ZNF296Q8WUU4 475 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 DNAJB3Q8WWF6 145 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 NTPCRQ9BSD7 190 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 NUSAP1Q9BXS6 441 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 SEMA6AQ9H2E6 1030 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 TMEM245Q9H330 911 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 PPCSQ9HAB8 311 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 MARCOQ9UEW3 520 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 TSR3Q9UJK0 312 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 PCDHGA2Q9Y5H1 932 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 MN1Q10571 1320 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 GMDSO60547 372 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 ZNF623O75123 536 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 BCAS1O75363 584 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 SLC2A3P11169 496 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 MYF6P23409 242 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 EIF2DP41214 584 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 HOXA1P49639 335 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 GDI2P50395 445 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 TPMTP51580 245 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 DDR2Q16832 855 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 SPATS1Q496A3 300 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 IQCCQ4KMZ1 466 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 ARCQ7LC44 396 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 KCT2Q8NC54 265 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 BHLHE22Q8NFJ8 381 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 SLC7A14Q8TBB6 771 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 TAS1R2Q8TE23 839 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 CMTM5Q96DZ9 223 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 ARL5BQ96KC2 179 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 NT5C1BQ96P26 610 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 SLC13A1Q9BZW2 595 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 TOR3AQ9H497 397 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 DUS2Q9NX74 493 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 REV1Q9UBZ9 1251 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 PSAT1Q9Y617 370 aa11.84□□□□□ -0.51
CDK5RAP3-232ENST00000584168 PGRP06401 933 aa11.83□□□□□ -0.51
CDK5RAP3-232ENST00000584168 GNAO1P09471 354 aa11.83□□□□□ -0.51
CDK5RAP3-232ENST00000584168 RALAP11233 206 aa11.83□□□□□ -0.51
CDK5RAP3-232ENST00000584168 CCR10P46092 362 aa11.83□□□□□ -0.51
CDK5RAP3-232ENST00000584168 GPX6P59796 221 aa11.83□□□□□ -0.51
CDK5RAP3-232ENST00000584168 FAPQ12884 760 aa11.83□□□□□ -0.51
CDK5RAP3-232ENST00000584168 SLC12A1Q13621 1099 aa11.83□□□□□ -0.51
CDK5RAP3-232ENST00000584168 TMEM81Q6P7N7 255 aa11.83□□□□□ -0.51
CDK5RAP3-232ENST00000584168 ANKS1BQ7Z6G8 1248 aa11.83□□□□□ -0.51
CDK5RAP3-232ENST00000584168 RNF135Q8IUD6 432 aa11.83□□□□□ -0.51
CDK5RAP3-232ENST00000584168 TDRD5Q8NAT2 981 aaKnown RBP11.83□□□□□ -0.51
CDK5RAP3-232ENST00000584168 OR6Q1Q8NGQ2 317 aa11.83□□□□□ -0.51
CDK5RAP3-232ENST00000584168 TFB1MQ8WVM0 346 aaKnown RBP11.83□□□□□ -0.51
CDK5RAP3-232ENST00000584168 ASB12Q8WXK4 309 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms