RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PAFAH1B3Q15102 231 aaKnown RBP11.1□□□□□ -0.63
CCDC47-206ENST00000584112 IFI16Q16666 785 aaKnown RBP11.1□□□□□ -0.63
CCDC47-206ENST00000584112 ANKRD20A8PQ5CZ79 823 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 NCBP2-AS2Q69YL0 99 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 TMPRSS9Q7Z410 1059 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 TAF8Q7Z7C8 310 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 FBXO39Q8N4B4 442 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 OR8K1Q8NGG5 319 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 FATE1Q969F0 183 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 SCRN2Q96FV2 425 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 MCCC1Q96RQ3 725 aaPredicted RBP11.1□□□□□ -0.63
CCDC47-206ENST00000584112 DNAJC7Q99615 494 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 ANP32EQ9BTT0 268 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 SYNDIG1Q9H7V2 258 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 CYP4F12Q9HCS2 524 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 FGF22Q9HCT0 170 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 KCND3Q9UK17 655 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 DNPEPQ9ULA0 475 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 MN1Q10571 1320 aaPredicted RBP11.09□□□□□ -0.63
CCDC47-206ENST00000584112 PRSS38A1L453 326 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 TMX2-CTNND1H3BSU7 103 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 NTN3O00634 580 aaPredicted RBP11.09□□□□□ -0.63
CCDC47-206ENST00000584112 MATN3O15232 486 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 AKR1B10O60218 316 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 MX2P20592 715 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 CCNCP24863 283 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 TEAD1P28347 426 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 EPHB1P54762 984 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 TCEA2Q15560 299 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 ZFYVE27Q5T4F4 411 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 DENND2CQ68D51 928 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 ALG1LQ6GMV1 187 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 GPR156Q8NFN8 814 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 OR1E3Q8WZA6 343 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 MAML1Q92585 1016 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 CCDC74AQ96AQ1 378 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 DTD2Q96FN9 168 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 ZNF830Q96NB3 372 aaPredicted RBP11.09□□□□□ -0.63
CCDC47-206ENST00000584112 TSGA13Q96PP4 275 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 GFM1Q96RP9 751 aaKnown RBP11.09□□□□□ -0.63
CCDC47-206ENST00000584112 TEX101Q9BY14 249 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 MRPL40Q9NQ50 206 aaKnown RBP11.09□□□□□ -0.63
CCDC47-206ENST00000584112 PRDM8Q9NQV8 689 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 FOXJ2Q9P0K8 574 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 MOSPD1Q9UJG1 213 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 PPIL1Q9Y3C6 166 aa11.09□□□□□ -0.63
CCDC47-206ENST00000584112 PRAMEF33A0A0G2JMD5 474 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 GOLGA6CA6NDK9 693 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 GOLGA6BA6NDN3 693 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 NPIPB15A6NHN6 443 aaPredicted RBP11.08□□□□□ -0.64
CCDC47-206ENST00000584112 PRAMEF10O60809 474 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 PYGLP06737 847 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 TMEM253P0C7T8 217 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 GOLGA6DP0CG33 693 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 CCNB1P14635 433 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 PNLIPP16233 465 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 GLB1P16278 677 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 ZNF30P17039 623 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 LHCGRP22888 699 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 ETV3P41162 512 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 TAS2R40P59535 323 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 DPTQ07507 201 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 PEX6Q13608 980 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 ASTE1Q2TB18 679 aaPredicted RBP11.08□□□□□ -0.64
CCDC47-206ENST00000584112 ATP13A4Q4VNC1 1196 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 SP5Q6BEB4 398 aaPredicted RBP11.08□□□□□ -0.64
CCDC47-206ENST00000584112 RAET1GQ6H3X3 334 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 OGFOD3Q6PK18 319 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 B3GNT8Q7Z7M8 397 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 CBARPQ8N350 705 aaPredicted RBP11.08□□□□□ -0.64
CCDC47-206ENST00000584112 FAM46DQ8NEK8 389 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 KIAA1524Q8TCG1 905 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 PIH1D2Q8WWB5 315 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 FAF2Q96CS3 445 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 LGR4Q9BXB1 951 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 PACSIN1Q9BY11 444 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 TMEM168Q9H0V1 697 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 EPB41L5Q9HCM4 733 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 GOLGA6AQ9NYA3 693 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 PISDQ9UG56 409 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 TTLL3Q9Y4R7 772 aa11.08□□□□□ -0.64
CCDC47-206ENST00000584112 TNRC6AQ8NDV7 1962 aaKnown RBP11.07□□□□□ -0.64
CCDC47-206ENST00000584112 A0A0J9YYE9 177 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 ZNF487B1APH4 448 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 B4DGG1 531 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 TCP11X1B4DZS4 312 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 D6RAR5 112 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 FZD6O60353 706 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 MAP3K6O95382 1288 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 TRBC1P01850 177 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 RPLP0P05388 317 aaKnown RBP11.07□□□□□ -0.64
CCDC47-206ENST00000584112 CTPS1P17812 591 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 ARHGAP25P42331 645 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 GPR1P46091 355 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 RPL26P61254 145 aaKnown RBP11.07□□□□□ -0.64
CCDC47-206ENST00000584112 CDK3Q00526 305 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 ILF3Q12906 894 aaKnown RBP eCLIP11.07□□□□□ -0.64
CCDC47-206ENST00000584112 EIF3IQ13347 325 aaKnown RBP11.07□□□□□ -0.64
CCDC47-206ENST00000584112 MESDQ14696 234 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 C14orf28Q4W4Y0 310 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms